Pseudomonas sp. C5pp, RR51_RS12685

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. C5pp Contig13, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCTGGTACTTCCTGGTGCCAGACCTGCTGCCAGAAGGCCTGCAGGAATGGTTCAAGCAGGACCTCAACCCGACCACCTCGGCGCTGATCAGCGTAGTCAT CTGCCTGGGCCTGTTCACTGCCGCCCGCGTGTGCGAGCAGGTGCGTACCGGCATCCAGGCGCTGCCCCGCGGCCAGGAAGCCGCCGCCCGCGCCATGGGC TTCAGCCTGTCGCAGATCTACACCAACGTGCTGCTGCCACAAGCCTACCGGATCATCATTCCGCCGCTCACCTCGGAATTCCTGAACGTGTTCAAGAACT CGTCGGTGGCGTCGCTGATCGGCCTGATGGAACTGCTGGCACAAACCAAGCAGACCGCTGAGTTCTCGGCGAACCTGTTCGAGGCCTTCACCTTGGCCAC GCTGATCTACTTCACCCTGAACATGGGCCTGATGCTGCTGATGCGCATGGTCGAGAAGAAAGTCTCGGTGCCCGGCCTGATTTCCGTAGGGGGCAAATAA
DNA Sequence for Gene
>RR51_RS12685
ATGGACATGGATTTCAGCGAAATCATCCCGGCCCTGCCTGCCCTTTGGGAAGGCATGGTCATGACCCTGCAGCTGATGATAATGGGCGTGGTTGGCGGCA TTGTACTGGGGACCATCCTGGCCCTGATGCGCCTGTCGTCGAGCAAGCTGCTGTCGAACGTGGCCGGCGCCTACGTCAACTACTTCCGCTCGATCCCGCT GCTGCTGGTAATCACCTGGTTCTACCTGGCGGTACCATTCGTGCTGCGCTGGATTACCGGTGAGGACACCCCGGTAGGTGCTTTCACCTCCTGCGTGGTG GCATTCATGATGTTCGAGGCCGCGTACTTCTGCGAAATCGTCCGCGCCGGCGTGCAGTCGATCTCCAAGGGCCAGATGGGCGCCGCCCAGGCCCTGGGCA TGACCTACGGCCAGACCATGCGCCTGATCATCCTACCCCAGGCCTTCCGCAAGATGACGCCGCTGCTTTTGCAGCAGAGCATCATCCTGTTCCAGGACAC CTCGCTGGTCTACACCGTGGGCCTGGTGGACTTCCTCAACTCGGCACGCTCCAACGGCGACATCATCGGGCGCTCCCATGAGTTCCTGATCTTCGCCGGT GTCGTGTACTTCCTCATCAGCTTCTCCGCTTCGTGGCTGGTCAAGCGCCTGCAAAAAAGGATCGCCGTATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTTCCATCAAGAACGTAAACAAGTGGTACGGGGACTTCCAGGTACTGACCGACTGCAGCACCGAGGTCAAGAAGGGTGAAGTGGTGGTGGTCTGCGGCCC GTCGGGCTCGGGCAAGTCCACCCTGATCAAGTGCGTCAACGCCCTGGAGCCGTTCCAGAAAGGTGACATCGTGGTCGACGGCACCTCGATCGCCGACCCC AAGACCAACCTGCCCAAGCTGCGTTCGCGCGTTGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGTCCATCACCGAGAACCTGACCATCGCCC AGCGCAAGGTGCTTGGCCGCAGCGAAGCAGAAGCGACCAAGAAGGGCCTGGCCCTGCTCGACCGCGTCGGTCTCGGTGCCCACGCCAAGAAGCACCCCGG CCAGCTGTCCGGCGGCCAGCAGCAGCGCGTGGCCATCGCCCGCGCCCTGTCGATGGACCCGATCGTCATGCTGTTCGACGAACCGACCTCGGCCCTGGAC
Amino Acid Sequence
>glutamate/aspartate transporter permease GltK
MDMDFSEIIPALPALWEGMVMTLQLMIMGVVGGIVLGTILALMRLSSSKLLSNVAGAYVNYFRSIPLLLVITWFYLAVPFVLRWITGEDTPVGAFTSCVV AFMMFEAAYFCEIVRAGVQSISKGQMGAAQALGMTYGQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARSNGDIIGRSHEFLIFAG VVYFLISFSASWLVKRLQKRIAV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site