Pseudomonas sp. C5pp, RR51_RS12145

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. C5pp Contig12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACCTTCGGGTAACGCTGGCGAAATACCTTCAGCGAGTGGGGCAGCAGGTTGCCGGCAAAGGCCGGCATGGCCGCCACCGAAACCCGGCCCAGTTGCAGG GTGAAACGCTGGCGCAGCATTTCTTCGGTGTCGTCCCAGTCGGCCAGCAGGCGCCGTGCCAGCGGCAGCAGCACCTCGCCCTCGGCAGTCAGGCTGACGC TGCGCGTGGTGCGGCTGAGCAGGGCGCCGCCAAGGTTTTCTTCCAGGGCCTTGATGGTCAGGCTCAGTGCCGGTTGCGAGACATGCAGGTGTTCACCGGC CTGGGCGAAGCTCTGGTACTTGGCCACAGCGACAAAGGCGCGCAGTTGCTTGACGTTCATGACAGGCCTGTTGGTTGTTTTGCAAAAGTTATCAATCGAT GATGAAAACAAAATTAACAAATCAGTCGCTTGCGGTGAAGATGTCCCCACACGCTCACCGACAGCCTCGTCGGTTCAACAACTACAAAAGGCGGATCAGC
DNA Sequence for Gene
>RR51_RS12145
ATGGCCGGACTGGACAAGCGCGTTGCAACCTATGAACAGGCCCTCGAAGGCCTGACCGACAACATGACGGTACTGGCTGGTGGTTTCGGCCTGTGCGGTA TCCCTGAAAACCTTATCAGCGAAATCAAGCGCCGTGGCGTCAAGGGCCTGACCGTAGTCTCCAACAACTGCGGTGTCGACGGCTTTGGCCTGGGCGTGCT GCTGGAAGACCGGCAGATCCGCAAGATGGTCGCTTCCTACGTAGGCGAGAACGCCGAGTTCGAACGCCAGCTGCTGAGCGGCGAGCTGGAAGTGGAACTG ACCCCGCAAGGCACTCTCGCCGAGAAAATGCGCGCCGGTGGCGCCGGCATCCCGGCCTTCTACACCGCCACCGGCTACGGCACCCCGGTTGCCGACGGCA AGGAAGTGCGCGAATTCAACGGCCGCAAGTACATCCTCGAAGAATCCATCACCGGCGACTTCGCCATCGTCAAGGGCTGGAAGGCCGACCACTACGGCAA CGTGGTGTACCGCAACACCGCGCAAAACTTCAACCCGCTGGCGGCCACCGCCGGCAAGATCACCGTGGTCGAAGTGGAAGAGATCGTCGAACCTGGCGTG CTGCTGCCCAGCGAGATCCACACCCCGGGCATCTACGTGGACCGCGTCATCGTCGGCACCTTCGAAAAGCGTATCGAAAAGCGCACCGTCAAGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGCCATCCACCAGAACAACAAAGAGATCCTGACCATGGCACTGACCCGCGAACAGATGGCGCAACGCGTCGCCCGTGAACTGAAGGACGGCTACTACGT AAACCTGGGCATCGGCATTCCGACCCTGGTGGCCAACTACGTACCCGCCGACATGGATGTGATGCTGCAATCGGAAAACGGCCTGCTCGGCATGGGCGAA TTCCCCACCGAAGGCACCATCGATGCCGACATGATCAACGCCGGCAAGCAGACCGTCACCGCCCGCCGCGGTGCCTCGATCTTCGATTCGGCGCAGTCGT TCGCCATGATCCGTGGCGGCCACGTCGACCTGACGGTGCTCGGCGCTTTCGAAGTGGATGTGCAAGGCAACATCGCTTCGTGGATGATCCCGGGCAAGCT GGTGAAGGGCATGGGCGGCGCCATGGACCTGGTGGCCGGTGCCGAGAACATCATCGTCACCATGACCCACGCTTCCAAGGACGGCGAGTCCAAGCTGCTG
Amino Acid Sequence
>3-oxoacid CoA-transferase subunit A
MAGLDKRVATYEQALEGLTDNMTVLAGGFGLCGIPENLISEIKRRGVKGLTVVSNNCGVDGFGLGVLLEDRQIRKMVASYVGENAEFERQLLSGELEVEL TPQGTLAEKMRAGGAGIPAFYTATGYGTPVADGKEVREFNGRKYILEESITGDFAIVKGWKADHYGNVVYRNTAQNFNPLAATAGKITVVEVEEIVEPGV LLPSEIHTPGIYVDRVIVGTFEKRIEKRTVKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site