Pseudomonas sp. C5pp, RR51_RS05750
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. C5pp Contig05, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGGGAAGCCAGCACCGGAGCGTGGCGCATCGATTACAAAGTTTGGGAGTTCTGCCATGTCCTGAGTGGACGCTGCGTCATCGAGCTTGAGGGATGCGCC CCCATCACGCTGGCCGCTGGCGACACGTTCATTATCGAACCGGGCGCCAAGGGCAAATGGACCGTGCTGGAAGATATGAAAAAGAACTTCGTGATCCTTT TGCCCGCGAACTAAGGCTCGCGTTTCATCGAGCGCAGCGCATGGACAGTTAGCATGCTTGCCTGCTGGCAGCGCTCGAATGTTCTTTGGCAGGCCACAAC AGCCCTCTAAACCTCATGTCCGCGCTGTCGCGCATGGAGCTGAGCCTTTGTGGGGACGGCATTAGTGTCGCGAAAGGGGCTCAGCACGGCCTCAGGATCC TGAGTCCGCGTCAAACTGCCAACCACCGATCGTCAGCTCCATCGACCTCCAGTCCTGCTGCCCGGTCAACCGGGAGACCCTAGGCCGCGATGGTGAACCA
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| DNA Sequence for Gene |
>RR51_RS05750
ATGGACGTCCTTGCTGACAATGAAATGTCGACCCGTAGTCATGTGGTCGGGCAACTGATCGTGGTGTTTTCCTTGATTCTGCTGCTGGCCTTGTTACTGG GGCTGTTCTCCCTCTACCGCCTCGCCGAGGCGCTGGATGCCCGGCAAGTGCAGCAAAGCCGCTTCTATGCTGAATCCGCCATGGCCCAGTTGCAGAAAAA CGACAAGACGTTCCTGCTGACCCATGCCAACTGGCAGGCCGCCTATGATCACTTGAGCGGGCAGGTCGATGCACATTGGGCATACGACGAGGACAACGTT GGCGCCACGCTTTATACCTCCGATGGGTACGAAGGCGTATATGTGCTCGATGACGACGGCACTCGGTACGCAATACTGGACGGTAAGCTCAGCCAGCAGG GCCTGGAGCATCATACTGTCAGTGCTGGCAAGATCCTGCAGGAGGCTCGGCAAGCAGCTCAGCACGATCAGGCGTCTTCAGGCTACCTGGTCTTTCGTGG CCAGCCGGCGGTGTACGTCGCTGCACTGATCCGCCCGCAGACCCAGCCGGCCCGCCCGCCGGGACCAACTGCGGTGTTGGTGTTCATTCGGGTTCTATCG CCACAGGTGCTCTTGCCGCTGGGCCAGGCGGCGGGGTTGTCCGGCCTGGCCGTGGACGATTCGGCCGATCAGCGTCAAGGGCGCGGTGCCCTGCCACTCG AAGGCAGCGGCCACGCCTTGACATGGGATATTCCGCAGCCTGGCACCGAACTGATCCAGACGGTTATCGCGCCCTTGGCTATCGCCGTTCTATTCATCGC GATGAGCATGGCATTGTTTGCACGCTATGCGATTCGGGCCAGCACCAGGATCGATCGTAGCCACCGTGCTCTGATGACTTCCCGGGTTGCCCTGCAATCG AGTGAAGAGCGCTTCAAGGCCGTGGCCGAAGCCGCGTCGGACTGGATATGGGAAACTGATGTACTCCTTCGGCTGACCTACCTTTCGGACCGGTTCACCG AACTCACCGGGCACCCCGTCGAAGCGTGGCGACAGCGCCCGATTACCGAGTTGCTGTCGTGTGACACCAGTAACCTGCGGACCTCGCTGCACAGCCTGGC CGCGACAGGCTCTTCCGGCACGCTGCGTTGCCAATATCAGGACCATCTCGGTCAACAGCGCATCTGCAGGATCGCATCTCGTGCGATCGTGGCCGAGGGC GTCTGTACCGGCTTTCGTGGCACGTGCAGCGACATCACCGACGAAGTGGCCGCCCATGCCCAGATTCAGCACCTGTCTTTGCACGACGCCCTGACCGGCC TGCCTAATCGCAACAAGCTGTTCCGATTTCTCGAACAATCAACGCCTGGCGCCCAGCTGGCGCTGTTGATGCTGGACCTGGACAACTTCAAGCCCATCAA CGACAGCCTTGGGCATCCAGCCGGCGACGCGGTGCTGCTCGAGGTAGCGAGCCGCCTCGGTCGAGCTACCCGTGACAGTGATCTGGTCGCCCGTCTGGGA GGTGATGAATTCATCGTCGTACTTACCCGGCCGGGCGATCACGAAGACATGGACCGGTTCTGCATGCGCGTGATCGAGGCGATCAAGCGCCCCATTCAGG TCGAAGGGCATGTCGTGCAAGTGGGGGTGAGCCTGGGTGTAGTGCTGTCGGCCGAATACCCCGGTACACCGAGCGACCTGATCCGGCACGCCGACGTGGC CCTTTACAGCGCCAAGCAGGCGGGCAAGAACACCTGGCGCTTCTTTTCGGCACAGATGAACGCAGCATTGATGGAGAAACGTGTGCTGGAAAGCGAGTTG CGCGAGGGTATACCGCGTGGCGAACTGGTGCTGCATTTTCAGCCGCGCTTCAAGGTCGATGGGGTCTCGATCGCATCGGCCGAGGCCCTGGTGCGCTGGC AACACCCTCGCTTGGGCCTGCTGCGCCCGGACCGTTTCATTCCACTTGCCGAAGAGTCCGACCTTATCGTGCTGCTTGGCAACTGGGTGCTGCATGACGC CTGCATCAAGGCGCGGGGCTGGCCGCAGGCGGTGATGGTCTCGGTCAACATGTCGCCGGCCCAGTTCAGCCGCAGCGATGTGGTCCGCGACGTCGGTAAC GCGTTGCGCGCCACCGGGCTGCCAGCCCACCGCCTGGAGCTGGAAATTACCGAAAACGTCATGCTCAACGATGTCGAAGGCGCACTGCACACCATGCTTG CACTGAAGGAGCTGGGCGTGCGCCTGAACATGGACGACTTCGGGACCGGTTACTCCTCGCTGGGCTACCTGCGTACCTACCCGTTCGACAGCATCAAGAT CGACAAGCGCTTCGTGCAGCACCTGGGCAAGAGCGGCAGCGACCGTAGCGTGGTCCAGGCCATCATCAACCTTGGCAATGCAATGGGCATGACGGTGACT GCCGAAGGTGTCGAGACCGCCGAGCAATTGGCCTTGCTCAGCGATGACCAATGCCATGAAGTACAAGGCTTCCTGCTCAGCAAACCGCTGGAAAACGAGG CACTGATGGGGATGATGAAAGACCAGGTGTCGTTAGCGCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCCTCGCAGAGGAGGGCAGTTTCATTCGGATGCAAACGACGGCCGTTCCGCGAACCATGCCACCGCCAGCTCCTTGAACGCCTCAGCCGAAGGCGTCAG CGGATAGCGTTGATCATGCGCCAGCACGATGCTGTGCGTTGGCAGTTTCTCCTCGGTCGGCCGACATACCAGCGCTTGACCATCATAACTGCGGTCACCA AATGGCCGGGTGTAGATCAGCGCCACGCCAAACCCGTTGGCGACCAGGCTACGCTGCATCTCGAAGGTGCGCACACGGTGTACAGCGGCGGGCGAAAGAT CGTAGAAGCTGAACAGATCCAGCACATGCTGCCAGCTGTGGACCTGATCGGTGACTACCAGTGTGTATTCGGATAGCGCTTTGAGGCTGACGCGCGATTC CCTGGCCAACGGGTGATCGGCAGCCAGCAGTACCTGAGCGGTCAGCTGGCACAACTGGGTGCATTGAGTGTTCGGCGGCAGGCCCAGATCGTAGGTGATC
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| Amino Acid Sequence |
>histidine kinase
MDVLADNEMSTRSHVVGQLIVVFSLILLLALLLGLFSLYRLAEALDARQVQQSRFYAESAMAQLQKNDKTFLLTHANWQAAYDHLSGQVDAHWAYDEDNV GATLYTSDGYEGVYVLDDDGTRYAILDGKLSQQGLEHHTVSAGKILQEARQAAQHDQASSGYLVFRGQPAVYVAALIRPQTQPARPPGPTAVLVFIRVLS PQVLLPLGQAAGLSGLAVDDSADQRQGRGALPLEGSGHALTWDIPQPGTELIQTVIAPLAIAVLFIAMSMALFARYAIRASTRIDRSHRALMTSRVALQS SEERFKAVAEAASDWIWETDVLLRLTYLSDRFTELTGHPVEAWRQRPITELLSCDTSNLRTSLHSLAATGSSGTLRCQYQDHLGQQRICRIASRAIVAEG VCTGFRGTCSDITDEVAAHAQIQHLSLHDALTGLPNRNKLFRFLEQSTPGAQLALLMLDLDNFKPINDSLGHPAGDAVLLEVASRLGRATRDSDLVARLG GDEFIVVLTRPGDHEDMDRFCMRVIEAIKRPIQVEGHVVQVGVSLGVVLSAEYPGTPSDLIRHADVALYSAKQAGKNTWRFFSAQMNAALMEKRVLESEL REGIPRGELVLHFQPRFKVDGVSIASAEALVRWQHPRLGLLRPDRFIPLAEESDLIVLLGNWVLHDACIKARGWPQAVMVSVNMSPAQFSRSDVVRDVGN ALRATGLPAHRLELEITENVMLNDVEGALHTMLALKELGVRLNMDDFGTGYSSLGYLRTYPFDSIKIDKRFVQHLGKSGSDRSVVQAIINLGNAMGMTVT AEGVETAEQLALLSDDQCHEVQGFLLSKPLENEALMGMMKDQVSLAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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