Pseudomonas sp. C5pp, RR51_RS04310

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. C5pp Contig04, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAAGCAGATCGGACTGAAGCTGGACATCCGTGTGATGGAGTGGGCCGAAATGCTACGCCGGGCCAAGAAGGGCGAGGCCGACCTGGTGTCCACCGGCTGG GCCGGCGACAACGGCGACCCGGACAATTTCCTCAGCCCGCTGCTCAGTTGCGATGCCGCCAAAAGCGGCGAGAACTATGCACGCTGGTGCAACCCCAAGT TCCAGGAGCTGATCAGCCGCGCCCGCGAAGTGATCGACAACGACGAGCGTGCAAGGCTCTATAACGAGGCATTGAAAGTGTACGATGACGAACAACCCTG GATCAGCATGGCCCATCCGAAGATGTTCACCGCCATGCGTGACAACGTGGAGGGCTACGTGATCAACCCTCTGACCAACAACAACTTCGCCACCACCAAG GTGAAGTAGAACAACAACGACCGCCGGCAACCCACACGGGGACCGGCGGCACCACCGTAGCGGGCTGATCGCCCCACGGCCTGATGAGGTAACCCCGACA
DNA Sequence for Gene
>RR51_RS04310
ATGTTGAGCTTTATTGCCCGGCGCCTTGGCCTGCTGATACCGACCTTTTTCGGTATCACCTTGCTGACCTTCGCGCTCATACGCCTGATCCCCGGCGACC CGGTGGAAGTGATGATGGGCGAGCGCAGGGTCGACCCCGAAATGCATGCCCAGGCCATGGAGCGCCTGGGGTTGAACAAGCCGCTGCCGGTCCAGTACCT GGACTACGTCGGCAAGCTGGCCCAGGGTGACCTCGGTGAATCGCTGCGCACCCGCGAGAGCGTGTGGAGCGAGTTCCTCACCCTGTTCCCGGCCACACTC GAACTGGCCTTCGCCGCCCTGCTGTTCGCTGGCATCGTCGGCCTGCTGGCCGGGGTGATCGCCGCGCTCAAACGTGGTTCGCTGTTCGACCACGGGGTGA TGGGCATTTCCCTGGCGGGTTATTCGATGCCGATCTTCTGGTGGGGCCTTATCCTGATCATGTTCTTCTCGGTAAGCCTGGGCTGGACCCCGGTGTCCGG GCGCATCGACCTGCTCTACGACATCGAGCCGAAGACCGGCTTCATGCTCATCGACACCCTGCTCAGCGACGAGGAAGGTGCATTCAAGGACGCGGTGATG CACCTGATCCTGCCGGCCATCGTGCTCGGCACCATCCCGCTGGCGGTGATTGCCCGCATGACCCGCTCGTCGATGCTCGAAGTGCTGCGCGAGGACTACA TCCGCACCGCCCGCGCCAAAGGCCTGTCGCCGGCACGCGTGGTGTTCGTGCACGGCCTGCGCAACGCGCTGATCCCGGTACTGACCGTATTCGGCCTGCA GGTCGGCACGTTGCTGGCCGGTGCGGTGCTGACCGAAACCATCTTTTCCTGGCCGGGCATCGGCAAGTGGCTGATCGAAGCCATCGGTGCCCGTGACTAC CCCGTGGTCCAGAACGGCATCCTGTTGATCGCCTGCCTGGTGATCCTGGTCAACTTCGTCGTGGATATCCTCTACGGCCTGGCCAACCCACGCATCCGTC ATCAGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCCTTCGCCATGACTAGCCCGATTCCGAAATCCGTCACGCCGGCCAGCCCGGTGGACCAGAGCCTGCTCTACCCCTCGCCATACAAAGAATTCTGGCAA GCCTTCGCCCGCAACAAAGGCGCGGTGATGGGCCTGGCCTTCATGTGCCTGGTAGTGTTCTGCGCGCTGTTCGCGCCGTGGGTCGCCCCGCACGACCCGA GCGAGCAGTACCGCGAATTCCTGCTGACCCCACCGGTGTGGCTCGAAGGTGGCAGCTGGCAGTTCATCCTCGGCACCGACGAACTGGGCCGCGACCTGCT TTCGCGGCTGATCCAGGGCGCGCGGCTGTCGCTGCTGATCGGCCTGTCGTCGGTGGTGATGTCGCTGATCCCTGGCATCCTGCTGGGCCTGCTGGCCGGT TTCTTCCCGCAACTGCTCGGCCCGTCGATCATGCGCCTGATGGACGTGATGCTGGCCCTGCCCTCGCTGCTGCTGGCAGTGGCCATCGTCGCCATCCTCG
Amino Acid Sequence
>peptide ABC transporter permease
MLSFIARRLGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERRVDPEMHAQAMERLGLNKPLPVQYLDYVGKLAQGDLGESLRTRESVWSEFLTLFPATL ELAFAALLFAGIVGLLAGVIAALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIEPKTGFMLIDTLLSDEEGAFKDAVM HLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTARAKGLSPARVVFVHGLRNALIPVLTVFGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDY PVVQNGILLIACLVILVNFVVDILYGLANPRIRHQR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site