Pseudomonas sp. C5pp, RR51_RS04305

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. C5pp Contig04, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CATCGAGCCGAAGACCGGCTTCATGCTCATCGACACCCTGCTCAGCGACGAGGAAGGTGCATTCAAGGACGCGGTGATGCACCTGATCCTGCCGGCCATC GTGCTCGGCACCATCCCGCTGGCGGTGATTGCCCGCATGACCCGCTCGTCGATGCTCGAAGTGCTGCGCGAGGACTACATCCGCACCGCCCGCGCCAAAG GCCTGTCGCCGGCACGCGTGGTGTTCGTGCACGGCCTGCGCAACGCGCTGATCCCGGTACTGACCGTATTCGGCCTGCAGGTCGGCACGTTGCTGGCCGG TGCGGTGCTGACCGAAACCATCTTTTCCTGGCCGGGCATCGGCAAGTGGCTGATCGAAGCCATCGGTGCCCGTGACTACCCCGTGGTCCAGAACGGCATC CTGTTGATCGCCTGCCTGGTGATCCTGGTCAACTTCGTCGTGGATATCCTCTACGGCCTGGCCAACCCACGCATCCGTCATCAGCGCTGAGGCCTTCGCC
DNA Sequence for Gene
>RR51_RS04305
ATGACTAGCCCGATTCCGAAATCCGTCACGCCGGCCAGCCCGGTGGACCAGAGCCTGCTCTACCCCTCGCCATACAAAGAATTCTGGCAAGCCTTCGCCC GCAACAAAGGCGCGGTGATGGGCCTGGCCTTCATGTGCCTGGTAGTGTTCTGCGCGCTGTTCGCGCCGTGGGTCGCCCCGCACGACCCGAGCGAGCAGTA CCGCGAATTCCTGCTGACCCCACCGGTGTGGCTCGAAGGTGGCAGCTGGCAGTTCATCCTCGGCACCGACGAACTGGGCCGCGACCTGCTTTCGCGGCTG ATCCAGGGCGCGCGGCTGTCGCTGCTGATCGGCCTGTCGTCGGTGGTGATGTCGCTGATCCCTGGCATCCTGCTGGGCCTGCTGGCCGGTTTCTTCCCGC AACTGCTCGGCCCGTCGATCATGCGCCTGATGGACGTGATGCTGGCCCTGCCCTCGCTGCTGCTGGCAGTGGCCATCGTCGCCATCCTCGGCCCAGGCCT GATCAACACCGTGATCGCCATCGCCATCGTGTCGTTGCCATCCTACGTGCGCCTGACCCGCGCCGCCGTGATGGGCGAGCTTAACCGCGACTACGTCACC GCCGCACGCCTGGCCGGTGCCGGGCTGCCACGGCTGATGTTCGTCACCGTGCTGCCCAACTGCATGGCACCGCTGATCGTGCAGGCCACCCTCAGCTTCT CCTCGGCCATCCTCGACGCCGCCGCCCTGGGCTTCCTCGGCCTTGGTGTACAGCCGCCGACCCCGGAGTGGGGCACCATGCTGGCTTCGGCCCGTGACTA CATCGAGCGCGCCTGGTGGGTGGTGAGCCTGCCCGGCCTGACCATTCTGCTCAGTGTGCTGGCAATCAACCTGATGGGCGACGGCCTGCGCGATGCGCTG GACCCGAAACTCAAGAATGCCGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGAACGCCATGTCACTGTTGCAGATCAACAACCTGAACGTGCGCTTCGGCGACGCCAATGCGGTACCGGTGGTCGATGGCCTGGACCTGACGGTGGAG GCCGGCGAGATCCTGGCCATCGTCGGCGAATCCGGCTCGGGCAAGTCCGTGACCATGATGGCCCTGATGGGCCTGATCGACGCCCCCGGGCGCATCACCG CCGACTCGCTCACCTTCGACGGCACCGACATGCTCAAGCTCAGCGGTCGCCAGCGACGCAAAGTGGTGGGCAAGGACATCGCCATGGTCTTCCAGGACCC GATGACCGCGCTCAACCCCAGCTACACCGTGGGCTACCAGATCGAGGAAGTGCTGCGCCAGCATCTGGGCCTGAAGGGCAAGGCCGCGCGCCAGCGTGCC CTGGAGCTGCTGAAGAAGGTCGAGATCCCGGCTGCGGAAAGCCGCCTGGACGCCTACCCGCATCAGCTGTCCGGCGGCATGAGCCAGCGCGTGGCGATTG
Amino Acid Sequence
>binding-protein-dependent transport system inner membrane protein
MTSPIPKSVTPASPVDQSLLYPSPYKEFWQAFARNKGAVMGLAFMCLVVFCALFAPWVAPHDPSEQYREFLLTPPVWLEGGSWQFILGTDELGRDLLSRL IQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIMRLMDVMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVT AARLAGAGLPRLMFVTVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDAL DPKLKNAA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site