Pseudomonas sp. C5pp, RR51_RS02105

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00088
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1041 1178 6.3E-9
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 295 416 2.69E-11
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 438 562 2.36E-27
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1324 1342 9.6E-12
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1179 1363 2.1E-62
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 892 984 4.2E-16
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 1438 1498 7.5E-18
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 23 138 5.23E-19
Coils Coil Coil - - 1072 1099 -
SMART SM00260 chew_2 IPR002545 CheW-like domain 1356 1500 3.8E-23
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1348 1361 9.6E-12
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 441 528 1.8E-13
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 577 671 1.0E-11
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1180 1361 2.29E-36
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1531 1642 3.0E-28
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 1369 1500 1.5E-20
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 16 108 1.2E-7
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1223 1364 5.3E-23
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 575 661 1.34069E-8
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 891 1006 1.05E-26
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 439 536 7.7E-4
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1531 1642 4.75575E-33
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 925 988 1.84873E-7
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1178 1363 1.4E-53
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1529 1642 1.9E-36
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1268 1282 9.6E-12
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 439 562 0.0
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 575 677 0.02
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 715 837 2.59E-16
Gene3D G3DSA:3.40.50.2300 - - - 1531 1650 2.4E-42
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 1363 1496 1.02E-21
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 570 703 1.5E-16
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 890 987 1.8E-7
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 575 697 1.22E-20
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1227 1363 3.9E-14
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 439 528 1.16163E-10
CDD cd16916 HATPase_CheA-like - - 1186 1361 1.12082E-79
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 22 143 4.6E-10
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 716 844 6.2E-13
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1531 1647 3.27E-37
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 439 569 9.6E-29
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 890 1019 1.1E-28

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.