Pseudomonas sp. C5pp, RR51_RS01850

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. C5pp Contig02, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGCCATGGCCCGCGCCCATGAAGACCTGTCGAAGAAGTTCCGCTACAACCAGCGCCGCGAACTACGCCTGCTGGAAGAGGCGGGCGGTGTGGTGCGCC CGATCAGCGACTTCAGCGCGCAGGAAATCGCCAGCATGTACTGCGACCTGTTCCAGCGCCGCTGGGGCTTCCCTGCCACCGGCGCCGAGCGCATGGCCGA GGTGCTGGAACGCCTGCGTGAGCTGCTGATCGGCTCGGTGCTGCTGCTGGACGGCAAGCCGATTGCCATCCAGCTGGTATACCGTGTCGAAGCGCCGGAA TGGATCAGCGTCGAGTACATCAATGGCGGTGTCGACCCTGAAACCAAGGCCTTCAGCCCCGGCAGCGTGCTGAGCTTCCTCAATACCCAGGCCGCCTGGG AAGACGCCCGTGCACGCAACAAGCCGCTGCGGTTCTCGTTCGGCCGTGCCGACCGCGAGTACAAGGACCGCTGGTGCAACCCCGTACCGGTGTATCAGGC
DNA Sequence for Gene
>RR51_RS01850
GTGAGTCGCAAGCAGCAGTTGCTCAAGCGCCACCGGCGCAACAAGCGCCTGGGCCTGTTGGCGGGCCTGGTCGCGCTGGTGGCCATAGGTGCGTTCAGCT GGTGGTGGTTGCCACTGCTGCTGTTGCCGCTGTTGTGGGCGGCCCACGAGGCCTGGTTTGCCGACCACCTGTTCTACGCGCCAGGCGAGGACTACGCCTA CGACTTCGGCGAGCAGACCCGGGAGGCTCCTGCCAGCCTGAGCGGCGGCTTGCTCAAGGCTGAGTGCGTGCTGCAGGGCAACGAAACCCTGGTCCTCGAG CTGCGGGTAAAAAGCAGCTGGCTGGGGCGCTTCCTAGACCCGCAGGTCGAGCTGGTGGCTGGCGAGCAGGCCGACCGGCAAACCTTCGAGCGCGGTGTCG ATGGCGTGCGCTTCCTCAACCTCACCGGCCTCGCCGCACCTCTGCAGGCTGGCGCGTTGCGCCTGCGTGGCCGGCATTGTCGGCTGGCGGGCCAGCCGCG CTTGTGGATAACCCCGGCGGTCGAGCTGCAACGGCGCCGGGTGATGGTGATCGCGCCGCATGCCGATGATGCCGAGCTGGCCGCTTACGGCCTTTACAGC CAGGCCGACGAAGCCTGGGTAGTGACCCTGACCGCCGGTGAAATCGAGGCCGAGCACTATCAGCAGATGGGCTTGGCAAAGGCCGAGGCCGCGCGCCTGA AGGGCCGCCTGAGGGCCTGGGATAGTGTTGCCGTGCCACGCTGGGCCGGTGTGGCGGAATCGCGTTGCGTGCAGCTGGGCTACTTCTGCCTGCAACTGCC TGCCATGCAGGCTGCGCCAGACCAGCCGGCCGCTTCTCGCGAGGCCGACCTCGCCGACATTCGCGTATTCCGCCGATTCAACCCGTTCCCGCTGCCGGCC GATGGCGATGGCGCGCCGACCTGGCGCAACCTGCTCGCCGACCTGCGGGCCTTGCTGGAAATGGCCAGGCCAGAGGTGCTGGTGATGCCGCACCCGCAGC TCGACCCGCACCCCGACCACATCTGTGCCCAGGCAGCGGTGCTGGAAGCCTTGCAAGGCCTGGCCTGGCAGCCGCAAACCCTACTGTGCTACGCCAACCA CCTGCATGACAACGACCGCTGGCCGATGGGCGACAGTGGTGATGGCGTGGCCCTGCCGCCACAGCAGGACGCTGTCCAGGCCTGGGCTCCTTGCAGCCTG GTACTGGACCTGGCGACCCAGCGCGACAAGGCCATGGCCCTGGGCATGATGCACGACCTGCAGCCGCCAGCACCGTTCAAACGCCGCTTGCGCCGCTTGT TGCAGCGCTGGTTGGCCGGGCGGCGGTCGTCGCCTTACGGCGAGAACGAATTCTTCCGCAAGGCCGTGCGCCGACATGAACTGTTCTGGCGGCGTGAGCT GTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGCGCCCCATGGTTGACCGCGATGGCGCAGAGCGCCCAAGGAACCCAATGAAAGTCCTATTTCTGGTGCAGAAGGAACAGCGGGCGATTCTCGACCGCC TGTACGATGGCGTCGCGGCCAACTGCGAGTGCGACCTGCGCTGGTTGACCAGCGAAGACCAGCGCAACCTGCGCCGCTATTTCAAGCGTGAAGTGCAGGT CGAGCGTTATGACCGCATTGTTTTCTTCCTGCGTTTCAAACAGGAAATCCGTCAGGCGGCATTCATCCGTACGGTGCCGAACCTGGTCATCCTCGAGCAC GATGCCTACCAGAACTACATCCCGTGCAAGTACACCGGCAAGTTCAGCGCCCATTACCGCAAGCTGCCCTGGGCGCGGGTGATCAGCTCCGGCTACATGG TCAGCGAGCGCCTGCGTCAGGAAGGTTTCGACGCAGTCTTCGTGCCCAAGGGCTACGACGAGCAGTTGCTGGCCGACCAGGGGCGTGAGCGCGACATCGA
Amino Acid Sequence
>GlcNAc-PI de-N-acetylase
MSRKQQLLKRHRRNKRLGLLAGLVALVAIGAFSWWWLPLLLLPLLWAAHEAWFADHLFYAPGEDYAYDFGEQTREAPASLSGGLLKAECVLQGNETLVLE LRVKSSWLGRFLDPQVELVAGEQADRQTFERGVDGVRFLNLTGLAAPLQAGALRLRGRHCRLAGQPRLWITPAVELQRRRVMVIAPHADDAELAAYGLYS QADEAWVVTLTAGEIEAEHYQQMGLAKAEAARLKGRLRAWDSVAVPRWAGVAESRCVQLGYFCLQLPAMQAAPDQPAASREADLADIRVFRRFNPFPLPA DGDGAPTWRNLLADLRALLEMARPEVLVMPHPQLDPHPDHICAQAAVLEALQGLAWQPQTLLCYANHLHDNDRWPMGDSGDGVALPPQQDAVQAWAPCSL VLDLATQRDKAMALGMMHDLQPPAPFKRRLRRLLQRWLAGRRSSPYGENEFFRKAVRRHELFWRREL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site