Pseudomonas sp. C5pp, RR51_RS01820

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. C5pp Contig02, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCTGGCGGCCATTGCCACCTGCCTGGCCTTCTATCTCGTGTACGACCTGATCGCCCAGCGCGGTTCGTCCTACCGGCCGGAAATCTTCCACGCCGTGGT CGACATGATCGCCGCACATCCCTGGACCGGCCTTGGCCTGGGCGCTGCCTACGACGTCAGTGCAGTGGGCAAGCACTTCGACCACACCCACAACATGTTC ACCCACATCGCAGTGGAGTTGGGCCTGCCCGGCATGCTGCTGTGGGTCATGGTGTGGCTGTACACCCTGGGCGAAATCGTCCGCGCACGTGGCACGTTGT TCGGCAAGATCCTGCTCGGTTTCTGGGTGTACTCCACCCTGGCCATGCAGTTCGATGCCGCCAGCCTCACTGGTACGCCACGTGCCGAATGGTTCATCAG CTGGCTGCCCGTGGGCCTGGCCATGTTGCTGCCATGGGGGAGTGCCGAAAATGATGCCTGTGGTAAAATTTCCGGTTCAACCTGAACAGCGAGCTTGATA
DNA Sequence for Gene
>RR51_RS01820
ATGGCCGAAACACCGCGACCGGCGGAACACACCTCCAGCCTGAAGATCTACTTCCGGCTGCTGAGCTATGTGAAACCCTATGTCGGCATTTTCCTGCTGA GCATCATCGGTTTCGTGATCTTTGCCTCGACCCAGCCGATGCTGGCCGGGATCCTGAAGTATTTCGTAGATGGGCTGAGCAACCCCGAAGCGGTGTTGTT CCCAAACGTCCCCTACCTGCGCGACCTGCAACTGCTGCAGGCGGTGCCGTTGCTGATCATCCTGATCGCCGCGTGGCAGGGCCTGGGCTCGTTCCTCGGC AACTACTTCCTGGCCAAGGTTTCCCTGTGCCTGGTGCACGACCTGCGTGTGGAACTGTTCAACAAGCTGCTGGTGCTGCCTAACCGCTACTTCGACAACC ACAACTCCGGGCACCTGATCTCGCGCATCACCTTCAACGTGACCATGGTCACTGGTGCTGCGACCGATGCGATCAAGGTGGTGATCCGCGAAGGCCTGAC CGTGGTGTTCCTGTTTGGTTACCTGCTGTGGATGAACTGGCACCTGACCCTCGTGATGGTCGCCATCCTGCCGGTAATCGCGGTGATGGTCAGCGTCGCC AGCAAGAAATTCCGCAAGCAGAGCAAAAAAATCCAGGTAGCCATGGGCGACGTCACCCATGTCGCCTCGGAAACCATCCAGGGCTACCGCGTGGTGCGCA GCTTCGGCGGCGAGGCCTACGAGGAGCAGCGTTTCGGCAAGGCCAGCCAGAGCAATACCGACAAGCAGTTGCACATGACCAAGACCGGCTCGCTGTACAC GCCGATGCTGCAGCTGGTGATCTACACCGCCATGGCCGCGCTGATGTTCCTGGTGCTGTTCCTGCGCGGTGATTCCACTGCCGGTGATCTGGTGGCTTAC ATCACCGCCGCCGGCCTGTTGCCCAAGCCGATACGTCAGCTTTCGGAAGTCAGCTCGACCATCCAGAAGGGCCTGGCCGGCGCCGAAAGCATCTTCGAGC AACTGGACGAAGAGCCTGAAGTGGATACCGGTACCGTCGAGAAGGAGCGGGTGGAGGGGCGCCTGGAAGTGCGCAACCTCAGCTTCACCTACCCGGGTAC CGAGCGTGAGGTGCTGAGCGATATCAGCTTCGTAGCCGAGCCAGGGCAGATGATTGCACTGGTCGGCCGCTCCGGCAGTGGCAAGTCTACGCTTGCCGCG CTGATACCACGCTTCTATCACCACGACCAGGGGCAGATCCTGCTCGATGGCGTGGAGATCGAGAACTATCGCCTGCGCAACCTGCGTCGCCACGTTTCGC AGGTGACCCAGCATGTCACCCTGTTCAACGATACCGTGGCCAACAACATCGCCTATGGCGACCTGGCCGGCGCCCCGCGCGCCGACATCGAAGCCGCTGC GGCCGATGCCTATGCCAAGGAGTTCGTCGACCGGCTGCCGAAAGGCTTCGATACCGAAGTGGGTGAGAACGGCGTACTGCTCTCCGGCGGTCAGCGCCAG CGTCTGGCGATTGCCAGGGCACTGCTGAAGAATGCGCCGCTGCTGATCCTCGACGAAGCCACTTCGGCGCTGGATACCGAGTCCGAGCGGCATATCCAGG CTGCCCTGGACCATGTGATGCAGGGCCGTACCACGCTGGTGATCGCCCACCGTCTGTCGACCATCGAGAAAGCTGACCAGATCCTGGTCATGGACCAGGG GCGCCTGGTCGAGCGCGGCACCCATGCCGAGCTGCTTGCGGCCAATGGCCATTATGCCCGCCTGCATGCCATGGGCCTGGATGAGCCGGCCAAGGCCGAT ATCACCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCCTCGTTGATCGGGGCCATCGCGGCCCCGATTGTCACGGGAATTTTCCTGGGGTGATCTGGCCATAAAGCCGTCGTCTACCCTGTGCTAATATCCTGC CCCTGTTCATTATTTCCATATGGGTTGCCCATGAAGTTGTCCATGCCGCGTTTCGATCAAGCCCCGGTACTGGTGGTCGGCGATGTCATGCTCGACCGCT ACTGGCATGGCGGTACTTCGCGTATCTCGCCTGAAGCGCCAGTCCCGGTGGTCAAGGTCGATCAGATCGAGGATCGCCCCGGCGGCGCGGCCAACGTTGC CTTGAACATCGCCGCCCTGGGTGCACCGGCTTCGCTGATTGGCGTCACCGGCCAGGATGAGGCCGCCGACAGCCTGGCCAACAGCCTGCAAGCTGCAGGC GTGCGCTCGGTGTTCCAGCGCATCGCGCATCAGCCGACCATCGTCAAGCTGCGGGTCATGAGCCGTCACCAGCAGTTGCTGCGCATCGATTTCGAAGAGC
Amino Acid Sequence
>ATP-binding protein
MAETPRPAEHTSSLKIYFRLLSYVKPYVGIFLLSIIGFVIFASTQPMLAGILKYFVDGLSNPEAVLFPNVPYLRDLQLLQAVPLLIILIAAWQGLGSFLG NYFLAKVSLCLVHDLRVELFNKLLVLPNRYFDNHNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFGYLLWMNWHLTLVMVAILPVIAVMVSVA SKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAYEEQRFGKASQSNTDKQLHMTKTGSLYTPMLQLVIYTAMAALMFLVLFLRGDSTAGDLVAY ITAAGLLPKPIRQLSEVSSTIQKGLAGAESIFEQLDEEPEVDTGTVEKERVEGRLEVRNLSFTYPGTEREVLSDISFVAEPGQMIALVGRSGSGKSTLAA LIPRFYHHDQGQILLDGVEIENYRLRNLRRHVSQVTQHVTLFNDTVANNIAYGDLAGAPRADIEAAAADAYAKEFVDRLPKGFDTEVGENGVLLSGGQRQ RLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMQGRTTLVIAHRLSTIEKADQILVMDQGRLVERGTHAELLAANGHYARLHAMGLDEPAKAD IT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site