Pseudomonas sp. C5pp, RR51_RS01345

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. C5pp Contig01, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCGGCTGGGTCAGTGCCAACTACGCGGCCGTCGCCTGCATCGACCTGCCCACCTGCCACGGCCAGTGGTGGCCGGCGGCGGACTTCAGCAACGGGTTCC ATCTGACCCAGCACGTCGGGCCCAACTACCTGGGTGGGCAACTGGACAGTGATGCGCGCACGGCCATCCACATCAGCCACCGCCTGGGTGCACTGCTGGT GACCTGCGTGCTGCTGATGCTCAGCTGGAAGCTGCACCGCTGCGGCCTCCCTGGCCTGGCGCGGCTGGTGCTGCTGGCGCTGGTGGTGCAAGTCGGCCTG GGCATCAGCAATGTGCTGCTGCACCTGCCGCTGGCCGTGGCCGTGGCGCACAACGCTGGTGGGGCGCTGTTGCTGCTGAGCATGGTGCTGGTGAACTACC GCATCCGCGTGGTCGACAAGGTTCGCGTGGGTGTCGGCCATGGCTGGCGCCTGCGGCCCGTGGCTGGCGTGAGCATTTCCCACCACATGAGGAATGACTC
DNA Sequence for Gene
>RR51_RS01345
GTGGCGACGCTTCTGAGCGCACAGAGGGCCAGTTGGCGTGACTACCTGGAGCTGACCAAGCCCAAGGTGGTGGTGCTGATGCTGATCACCTCGCTGGCGG GCATGTTCCTTGCCACCCGTGCGGGTGTCAGCTGGAGCGTGCTGCTGTTCGGCAACTTGGGCATCGGCTTTTGTGCAGGCGGCGCGGCGGTGGTCAATCA TGTGGTGGACCGACGCATCGACGCGCTGATGGCGCGTACCCACAAACGGCCGCTTGCCCAGGGCCGGGTCGAACCGCTGCCGGCGCTGCTGTTCGCCCTG GCGCTGGCGCTACTTGGCATGGCCCTGCTGCTGGTATTCACCAACGCCCTCACCGCCTGGCTGACACTGGCTTCCCTGCTCGGTTATGCGGTGCTCTACA CCGGTTTTCTCAAGCGCGCTACGCCACAGAATATCGTCATCGGCGGCTTGGCTGGCGCCGCCCCGCCGTTGCTGGGCTGGGTGGCGGTCAGTGGGCATGT CAGCGCCGAGCCCCTGCTGCTGGTGCTGATCATCTTCGCCTGGACCCCACCACACTTCTGGGCCTTGGCCATCCACCGCAAGGAGGAATACGCCAAGGCC GATATACCGATGCTGCCGGTGACCCACGGCGAGCGCTACACCAAGCTGCATATCCTGCTGTACACCCTGGTATTGCTGGCGGTAAGCATGCTGCCGTACG CCATCCATATGAGCGGCCCGCTGTACCTGGCCTGTGCCCTTGTACTGGGCCTGCGCTTCCTGCAATGGGCATGGGTGTTGTACCGTGGCAGCCGGCCGCA CGCAGCGATCGGCACCTTCAAGTACTCTATCGGCTACCTGTTCGCGCTGTTCATCGCGTTGCTCCTCGACCACTACCTGTTGCTGAACCTATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCGAACCCAGAAAACCGTCTTCATCCTCGTTGCCCTGGTCGCGTTGATCCTGGGCCTGACCGTCAACAAGGTGCTCAATGGCCGCGACCAGCCCAACCC CACCGAGCTGATCGATGCCGGCATCATCCTGCTGCCGCAGAGCCGTACCGTGGCCGACGTGACCATGACCAACCAGGACGGCCAGCCGGTGCAACTGGAT GACCTGAAGGGCAAATGGTCGTTGCTGTTCTTCGGCTACACCTACTGCCCGGACATCTGCCCGACCACCCTGGCCCAGCTGCGCCAGGTGAAGAGCGAGC TGCCCAAGGAGGCCGTCGACCGGCTGCAGGTGGTGCTGGTGAGCGTTGACCCGAACCGCGACACGCCGAACCAGCTGAAGCAGTACCTGGGTTATTTCGA CAAGGATTTCGTCGGGGTGGCGGGGTCGATCGAGGATACCCAGAAGCTGGCCAATGCCTTGAGCATTCCGTTCATTCCGGCCGATACCAGCAAGCCGGGG
Amino Acid Sequence
>protoheme IX farnesyltransferase
MATLLSAQRASWRDYLELTKPKVVVLMLITSLAGMFLATRAGVSWSVLLFGNLGIGFCAGGAAVVNHVVDRRIDALMARTHKRPLAQGRVEPLPALLFAL ALALLGMALLLVFTNALTAWLTLASLLGYAVLYTGFLKRATPQNIVIGGLAGAAPPLLGWVAVSGHVSAEPLLLVLIIFAWTPPHFWALAIHRKEEYAKA DIPMLPVTHGERYTKLHILLYTLVLLAVSMLPYAIHMSGPLYLACALVLGLRFLQWAWVLYRGSRPHAAIGTFKYSIGYLFALFIALLLDHYLLLNL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site