Pseudomonas sp. ARP3, ABX75_RS12785

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. ARP3 contig9, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGATGTTCAGTTCGGGCATCGGGCGTGCTTCGCCTTCGAACTCGGTGTCGACGCCAGCCATGATTTTCAACAGGGTGGATTTACCCGAGCCGTTGAGGC CGAGCACGCCGATCTTGGCGCCGGGGAAGAAGGACAACGAAATGTTTTTCAGGATTTCCCGCTTCGGAGGGACAACTTTGCCCAGCCGATGCATGGTGAA GACGTATTGAGCCATGGTGAACCTAGCGTCAGTGACTGATGAATTGAGCGGGCGAAGCCCGTGCCAGGCCATGCGCCGCGCGGGCCTTTGACTATCATCA ATGCCAGCGAGCGGAAAAAGCCTGAATATCTGGGGCTGGAACGCCCCCGCGTAACCGGCAAAGCTACCTGAATGCGCTTGGTCAGTCCAGCCAGGCGGGA CTGGCACTTTGCCACAACACAAGGCATGCTAGCCGCCCTCCGGGCGTCCGGCTTATAGTGCACGTCGCGCGCCAGTCCAGCCAAACCGCAGGATTACAGC
DNA Sequence for Gene
>ABX75_RS12785
TTGTCCAAAGTCACGCCGCCAACTCCTTTGCGCGCCGCTCATTTAGCGCCGGGAGCGCCCCTGCACGGTCCTCTTAAAGGCGCACTGGCGACGCTCGTCT TGCTGCTGCTCGCTTTATTGTTCTGGCAGTTGCTGGATCAACTGCAGCAAAACCAGAAAAACCAGCAGCAATACACCATCGACTACAGCGCCGACCTGGC CGAACAGATCAGCCTGAACATGGCCCTGAGCGCCAAGATCGCCCTGAACCTGCTGCCGATGGTCGAAGCACCGCGCGACCGCGAACAGCAACAGGCACTG ATGCTGACCTTGCAACGCTCCTTGCCGGAATTACGCAGCGTGGCCCTGCTCGCCCCCAGCGGCGCGATGATCAGCGACAGCGCGCCCGATAGCCAGGACG CCGCCTGGCTCGAAGATCTGGTACAGCGCAGCCACGGCCAAGCCTATTACCTGAGCAACAACGACGACGGTTCGCTCATCTATCTGTTGCTGCACCAGCC AAGCGGCGGTTCCAGGGTGTACTGGGCGTTGCGGCTGGCACCGGAGTACCTGACCAACCTCACCCGCCAGGACAACCCGGGCCAGCGCCCGGCGTGGGCC ATCGAGAACCGCCTCAACCACCGCGTGATCAGCCGTGACAGCGGCATGCCGGCCCAATGGACCAGCGCCCTGACCCCGGACGAATTGAACAAAAGTGTAC TGGTCACGCCTCTGAGCAAAAGCGATTGGCAACTGCGCGGCCTGTTCGACCGCAGCGCCGTGCTTGAGGAACTGCTACCGGCGTTCATCGGCAAATGCCT CCTGGGCCTGGCCTTCTCGCTGGTCCCCGTGATCGTTCTGTTTAACATGCGCCGTCGTCAGCGCCAGGTGCATGAGGGACGCCGCCGTTACCAGGACATT TTCGAAGGCACCGGCGTGGCCCTGTGCGTGCTTGACCTATCCGGCCTCACCACGTTCTTTGAACGCGCGCACCTGCGCAGCCGCGAACAATTGAACGCCT GGCGGCATGCCAACCCGGACGACTATCGCCAACTGCTCGATGAGCTGCGCATCACCGAAGTCAACCAGGTCGCGGTACGCCTGCTCAACGTGGGTTCGTG CGAAGACGCCTGGGAACGCTTGATCAGCGATTGCCCGAACAACGTTACCTCCATCGGTTACCAGATCCTCGAAGCGGTCCTGACCCAACAGGACCAGTTA GAGCTGGAAATCCAGCTCAACGATGTGGCCGGCAACGATCAATACCTGTGGCTGGTGATGCGCTTGCCAGAGCAGCAGGACGATTTCAAGGCGGTGATTC TCAGTATCAGCGATATCACCAGTCGCAAGCTGATCGAACTGTCCCTGGTGGAGCGCGAAAGTTTCTGGTCGGACGTGGTCCGCACAGTGCCGGACCACCT GTATGTACAGGACGTGATCAGCCAGCGCATGATTTTCAGCAACCACCACTTGGGCCAGACCCTAGGCTATAACCGCGTCGAACTGCAGCAAATGGGTGAG TACTTCTGGGAAATCCTGCTGCATCCCGAAGACGCCGAGCATTATCACGACTTGCGCCAGCAGCAACGCCAGACCGGTTATGCCACGCAACTGCACTGCC AACTGCGCTTTCGCCATCGCAACAACCAGTGGCGACGTTTCGATATCCGTGAACAGGCCCTGGCCCGGGACAAAACCTCTCAAGTCACCCGCATTATCGG GGTGGCCAAGGACATTACCGACCAGATCGAAGCCAGCGAATCTCTGCGCGACAGCGAGCAGCGCTACCGCATGTTGGCCGAGAGCATCAGCGACGTGATC TGCTCCACCGACAGCAATTTGGCCCTCAATTACATCAGCCCCTCGGTCAACGCCGTGTTGGGCTATGACGTGGACTGGGTGTTCAAGAACGGCTGGCAAT CGATCATCGCCAACCCGCAGCAACTGGCCGGCATTTACAGCCTGGTGGAACAGGTCAGCCGCGCCCTGGGCGACCAGGAGGCCCTGAGCAAGCTGCGCGA TCAGGTGCAGACCCAACTGTTTCTGTTCGACTGCCTGCGCGCCGACGGTCGTAAAGTGCCGATCGAATTGCGGGTGGTGCTGGTGTGGGACGAGCACGGC ACGTTCGAGGGCATCCTCGGTGTCGGTCGGGACATCAGCCAGCAACGCCGCGCGGAAAAAGACCTGCGCATGGCGGCCACGGTATTCGAGCACTCCACGT CGGCGATCCTGATCACCGACCCGGCAGGCTATATCGTGCAGGCCAACGAAGCGTTCAGCCGGGTCAGCGGTTATGAAGTGGCGGATGTGCTGGATCAGTT ACCCAACATGCTCACCGTCGACGAGCAGCAGGAAGCCCACCTGCGCTATGTGCTCAAGCAATTGCATCAGCACAGCACCTGGGAGGGCGAAGTGTGGCTC AAGCGCCGCAACGGCGAGCATTACCCGGCCTGGGTGGGTATTACCGCCGTGTTCGACGATGAAGGCGATTTGGCCAGCTACGTGTGTTTTTTCAGCGATA TCAGCGAGCGCAAGGCCAGCGAGCAGCGCATCCACCGCCTGGCCTATTACGACGCTCTGACCCACCTGCCCAACCGCACATTGTTCCAGGACCGCCTGCA CACCGCGTTGCAGTCGGCCGAACGGCAGAAGTCGTGGGTGGTGCTGATGTTCCTTGACCTGGACCGTTTCAAACCGATCAACGACTCCCTGGGCCATGCC GCCGGCGACCGCATGCTCAAGGAAATGGCGACCCGTCTGCTAGGTTGCGTCGCCGAAGACGACACCGTGGCGCGCATGGGCGGCGACGAGTTCACCCTGT TGCTGCAACCGCGGGTCAACCGTGAAATGGCGCTCAACCGCGCCATTCATGTGGCCGAGCAAATCCTGGCGAGCCTGGTGAGGCCGTTCGTGCTGGAGGG CCGCGAGTTCTTTGTGACCGCCAGTATCGGTATCGCCTTGAGCCCGCAGGATGGCAACGAGCTGAGCCAGCTCATGAAAAACGCCGACACCGCGATGTAC CACGCCAAGGAACGCGGCAAGAACAACTTCCAGTTCTACCAGGCCGACATGAACGCCAGCGCTCTGGAGCGCCTGGAACTGGAAAGCGACCTGCGCCACG CCCTCGACCAGAACGAATTCGTGCTCTATTACCAGCCGCAATTCAGCGGCGACGGCAAACGCCTGACCGGCGCCGAGGCGCTGCTGCGCTGGCGCCATCC GCGTCGCGGGCTGGTGCCGCCGGGGGACTTTATCCCAGTGCTGGAAGAGTTGGGCCTGGTAGTAGACGTGGGCGATTGGGTTATCGCCGAGGCATGTCGC CAGCTCAAGACCTGGCACCAGAACAAAGTCCGCGTGCCGAAAGTCTCGGTGAACATCTCCGCGCGGCAATTTTCCGATGGCCAACTGGGCACGCGCATCG CCACCATTCTGAAGGACACTGGCCTGCCGCCGGCATGCCTGGAGCTTGAGCTGACGGAAAGTATCCTGATGCGCGAAGTCAACGAAGCCATGCACATCCT CGACAGCCTGAAAAACCTGGGCCTGAGCATTGCGGTGGACGACTTCGGCACTGGTTACTCGTCGCTCAACTACCTCAAGCAGTTCCCCATCGATGTCCTG AAGATCGACCGCACCTTCGTCGACGGCCTGCCGTCCGGCGAGCAGGATGCCCAGATCGCCCGCGCCATTATCGCCATGGCTCACAGCCTGAACCTGGCGG TGATCGCCGAGGGCGTGGAAACCCACGAGCAGTTGGACTTCCTGCGCGAGCATGGTTGCGACGAGGTACAGGGCTACCTGTTCGGGCGGCCAATGCCAGC GCATCGGTTCGAAGCGCAGTTCAGCAATGATGCGCTGTTCATGTTCGATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGGGTGTGGCGCGGCCACTGGCCTCATCGGGGGCAAGCCCCCTCCCACATTTGAATGTATTCACAAGTCGAAGGTGGGAGGGGGCTTGCCCCCGATGAGG CCGGCACAGCCACCACCCATCCCGAAGTGAATCCCGCTTGTCCGCGACATGACGTCCTTTCATATGCCATCTAAAACCCATTGGGTTAGAATGCCCTCCT TTTCTGCCCCCGATCCTTGAGGACCGCCATGTTCAGCCGTGATTTGACTATTGCCAAGTTCGACGCCGATCTCTTCGCCGCCATGGAGCAAGAAGCCGTG CGCCAGGAAGAGCACATTGAGCTGATCGCTTCGGAAAACTACACCAGCCCCGCGGTCATGGAGGCTCAAGGTTCGGTTCTGACCAACAAGTACGCCGAAG GCTACCCAGGCAAGCGCTACTACGGTGGTTGCGAGTACGTCGACGTGGTTGAGCAACTGGCCATCGACCGCGCCAAGGAGCTGTTCGGCGCCGATTACGC
Amino Acid Sequence
>diguanylate phosphodiesterase
MSKVTPPTPLRAAHLAPGAPLHGPLKGALATLVLLLLALLFWQLLDQLQQNQKNQQQYTIDYSADLAEQISLNMALSAKIALNLLPMVEAPRDREQQQAL MLTLQRSLPELRSVALLAPSGAMISDSAPDSQDAAWLEDLVQRSHGQAYYLSNNDDGSLIYLLLHQPSGGSRVYWALRLAPEYLTNLTRQDNPGQRPAWA IENRLNHRVISRDSGMPAQWTSALTPDELNKSVLVTPLSKSDWQLRGLFDRSAVLEELLPAFIGKCLLGLAFSLVPVIVLFNMRRRQRQVHEGRRRYQDI FEGTGVALCVLDLSGLTTFFERAHLRSREQLNAWRHANPDDYRQLLDELRITEVNQVAVRLLNVGSCEDAWERLISDCPNNVTSIGYQILEAVLTQQDQL ELEIQLNDVAGNDQYLWLVMRLPEQQDDFKAVILSISDITSRKLIELSLVERESFWSDVVRTVPDHLYVQDVISQRMIFSNHHLGQTLGYNRVELQQMGE YFWEILLHPEDAEHYHDLRQQQRQTGYATQLHCQLRFRHRNNQWRRFDIREQALARDKTSQVTRIIGVAKDITDQIEASESLRDSEQRYRMLAESISDVI CSTDSNLALNYISPSVNAVLGYDVDWVFKNGWQSIIANPQQLAGIYSLVEQVSRALGDQEALSKLRDQVQTQLFLFDCLRADGRKVPIELRVVLVWDEHG TFEGILGVGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYEVADVLDQLPNMLTVDEQQEAHLRYVLKQLHQHSTWEGEVWL KRRNGEHYPAWVGITAVFDDEGDLASYVCFFSDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQSAERQKSWVVLMFLDLDRFKPINDSLGHA AGDRMLKEMATRLLGCVAEDDTVARMGGDEFTLLLQPRVNREMALNRAIHVAEQILASLVRPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMY HAKERGKNNFQFYQADMNASALERLELESDLRHALDQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPGDFIPVLEELGLVVDVGDWVIAEACR QLKTWHQNKVRVPKVSVNISARQFSDGQLGTRIATILKDTGLPPACLELELTESILMREVNEAMHILDSLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVL KIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQGYLFGRPMPAHRFEAQFSNDALFMFD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site