Pseudomonas sp. ARP3, ABX75_RS11005

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. ARP3 contig7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATTCCTCATAGCACTGTTTAGGGTCAGTGCTGAGAATAAGGACATGCCGCCGTGAACACACTCACACAACACTCGATGAAGGTACTGCTGACCAGCTGTG TACTCAGCCTCGGCATCAGTGCACCAGCCTTTGCCGGTGATGGTGTGATCGTGACGGGCCGCAACGTACAGGCACACATGTACGGTCGCGCCGCTTTCGG TAAAGACCCCTACCCCACCACCGCCAATGCCAATCCCACCCAAGAGGTTCTTGGCGCCACCGGCGAGCTCAGTGACCTGGCTATCAGCGGTGTCAGCAGC GGTTCAAGTTTCGCCCGCGCCAGCCAGATCGATAGCACGTTGACCGGCGTGCATGCCACGCAGAACAGCATGTCGACCCTCGGCACCGGCGCCACCGCCG GGCATGGCAGCGGCAGCAGCATGGGCGGACAGATCAGTGACTCGATCCAACGCGGCATGGCCCCTCTGAATAACCTCGGCAACATGATGGGGGGCAAATA
DNA Sequence for Gene
>ABX75_RS11005
ATGAACCGTACCTTGCTCTTGCTCGCCCTGCTGGGCAGTGCCTCGGCCATGGCCGACAACAACGCTGTGATCAACAACAGCGGCAAAGACTACCGCGGTA ACTTTTCGATCAACCAAGCGGCGGGCAATCAGCAGCAACAGGCCAATAACCGTGCCGTCACGCTCGGCGGCCAGGCCACCACCGTGAATATCCAACGGCT CGACGGTCAGGTCGATCCGTCTCTGAACGCCAAGGCTGCGATTCAGGGCGCTTCTTTTACCAATGGCAACGGCATGTTGGGCGTCAACCAGGCGGCCGGG GCCAACAACCAAACCGTCAACGCCGTGCGGATCAGCGTCAACCCTGGCCCGCAAAGCATCGACGACAGCGTCTTGTTGCAACAGAACACGACGCAATTAA CCGACTCAGGGCTCACCCCCACCACTGGCAGCCGCCTGGTCGTTACCAGCGACCAGGCCTTCACAGGCAGCCGAGGAGTGATTCAGGTGAACCAGAGTGC CGGGGTGGGGAACCGATTGGCTAACACCCTGGGCATCACTATCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGACTTGGTAGTACTCGCAAGACCGTACCAACACTTAACCAACTAATAGAAGCAAGGAGAAACACCATGAAACCTCAAATGGCTCTGAAACCTCTGGTTT TCGCTCTCGCCGCGCTCATGGCTGCTGCTGCTCAAGCAGGTGGCTGGCACCCTGCGCCTCAACCTACCGGCACTATTGCCGCTGTGGTCACTGACGTTCA AAACAGCGCCGGCAACAAGTTTGACGACACCAAGACCGAAAATAACGCCTCTGCCGATAATGCGGTCAACGGCAACAGCGGTAACGCGGGTGTCAACGTG CAAGCTGGCAGCGCTAACCAGGCTGACAACTCTGCCGCTATCTCCAGCGCCAAAGGCGATGCGGCCACCGTGTTCGGTGTGGTCGACGTGAATCAGAACA GCGTGCTGAACACCTACGTCAACAAAGGCACCCAGAACAACGCGTCTCTGGATAACGCCATCAACGGTAACTCCGGCAACGTGGGTTACAACGGTCAAGC
Amino Acid Sequence
>autotransporter adhesin
MNRTLLLLALLGSASAMADNNAVINNSGKDYRGNFSINQAAGNQQQQANNRAVTLGGQATTVNIQRLDGQVDPSLNAKAAIQGASFTNGNGMLGVNQAAG ANNQTVNAVRISVNPGPQSIDDSVLLQQNTTQLTDSGLTPTTGSRLVVTSDQAFTGSRGVIQVNQSAGVGNRLANTLGITIK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site