Pseudomonas sp. ARP3, ABX75_RS10200
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. ARP3 contig6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCTACGCCCTGCACAACCCGGCGCTGCACAGTCAAGGCGTGAAAGTCTTTGTGCTGGCCGAAGACAGCCAGGCGCGCAACCTGCCAGTGCCGGACTGG GCCAGCAGCGTGGATTATTCAGGGTTCGTGCAGTTGTCGATCGATTACGACAAGGTCAATACCTGGCTATGAATACGCTCACCGTCGGTTCGCGCAGCCT GGAACTGGACAAGGACGGCTACCTGGTCGACCTGAATGACTGGTCCGTCGAAGTCGCCAACGCCCTGGCCGCCGCCGAGGCCTTGGAACTGACGCCGGAC CACTGGCAGATCCTCAACCTGCTGCGCGAGTTCTACGCCCAATTCCAACTGTCCCCGGCCACGCGCCCGCTGATCAAATACACCGCCTTGAAGCTGGGCC CCGAAAAGGGCAACAGCCTGCACCTCAACAAACTGTTCAACGGCACTCCCGCCAAACTCGCCGCCAAGCTGGCGGGCCTGCCCAGGCCGACGAATTGCTT
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| DNA Sequence for Gene |
>ABX75_RS10200
ATGACCGACTTTGCCCCGCTGACCCTGCAAACCCCTGCCGAGCACCCCTTTGCGCAGTTCGTACGCATCCTGGGCAAAGGCAAGCGCGGTGCGCGCAACC TCACCCGTGAAGAAGCCCGCGAGGCGATGGGCATGTTGCTCGACGAAAAAGTCGAGGACACCCAACTCGGCGCATTTCTGATGCTGCTGCGGCATAAGGA GGAAAGCCCGGAAGAGCTCGCCGGCTTTACCGAGGCGGTACGCGAGCGTCTCAACGCCCCGGCGCTGAACGTCGATATCGACTGGCCCAGCTATGCCGGT AAAAAGCGCCACCTCCCGTGGTTCCTGCTGGCCGCCAAGTGCCTGGCACAAAACGGCGTGCGTATCCTGATGCACGGCGGCGGCGCCCACACCGCCGGGC GCCTGTACACCGAGCAATTACTGCACGGCTTGCAGATTCCGCTGTGCCGCGACTGGCAGCAGGTGGAGGCGGCGTTTGCCCAAGGTAACCTGGCGTTTAT TCCGTTGGGCGATTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAACACCCTGGGCCTGCGCTCGCCGATCCACTCCCTGGCGCGCCTGCTCAAC CCGCTGAACGCTCGGTGCGGCTTGCAAAGCATTTTCCACCCCGGTTACCAAGGCGTGCACCGCGATGCCAGCGGCCTGCTCGGCGACACGGTGATCGTGG TCAAGGGCGATGGCGGCGAGATCGAAATCAACCCCGATACCCTCAGCCATCTCTACGGCACCACCGGCGGCCAGAGCTGGGACGAAGAATGGCCCGCCCT CTCCGTCCAACGCCACGTCAAACCGGCAACCCTGGAGCCTGAACACCTCAAAGCCGTATGGCGCGGCGATGTCGAGGACAGCTATCCGCAACTGGCGCTG ATCGCCACCATGGCACTGGCGCTGCGCGGCCTTGGGCACCCCCGCGAACAGGCGTTTGCGATGGCGGAGGCTTACTGGCAAACGCGGGATAGATCGATTT AA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGATAAGTGACCCGCAGTCTTTGCGCTTTTAAATCGAACCCTGATCTTTAGACTGGGCTCCAACGCTTATTAGTCGAGGAGCCAGTCATGGGTTTGCTG ATCGAAGGACACTGGAAAGACCAATGGTACGAAAGTAGCGCGGATGGCGCTTTCCAGCGCGAACAGGCGCAACGCCGCAACTGGGTCACCGCCGACGGCC AGCCTGGCCCCAGTGGCGAGGGCGGCTTCAAGGCCGAAGCCGGGCGCTATCACCTCTACGTTTCCCTGGCCTGCCCGTGGGCACATCGCACGTTGATCCT GCGCAAGCTCAAGGGCCTGGAAAGCCTGATCGACGTGTCGGTGGTCAGCTGGCTGATGCTGGAAAACGGCTGGACCTTCGATAAGGCCACAGGCTCAACT GGTGATCGACTCGACGACTTTGCCTACATGCACCAACGCTACACCGCCGACACGTCCGACTACACTGGACGCGTTACCGTACCGGTGCTGTGGGACAAGC
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| Amino Acid Sequence |
>hypothetical protein
MTDFAPLTLQTPAEHPFAQFVRILGKGKRGARNLTREEAREAMGMLLDEKVEDTQLGAFLMLLRHKEESPEELAGFTEAVRERLNAPALNVDIDWPSYAG KKRHLPWFLLAAKCLAQNGVRILMHGGGAHTAGRLYTEQLLHGLQIPLCRDWQQVEAAFAQGNLAFIPLGDWAPQLQRMIDLRNTLGLRSPIHSLARLLN PLNARCGLQSIFHPGYQGVHRDASGLLGDTVIVVKGDGGEIEINPDTLSHLYGTTGGQSWDEEWPALSVQRHVKPATLEPEHLKAVWRGDVEDSYPQLAL IATMALALRGLGHPREQAFAMAEAYWQTRDRSI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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