Strain | Pseudomonas sp. ARP3 contig5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACCTGGTCAGTCCGCTGTGGCGCTTTGTGCTGGCGCCGGGTGTGTGCGGGCCGGACGCCGCCGCAGGTGTGGTGATGCCGAGCATTGACAGGGTCGGGCG GTATTTCCCGCTGGCAGTGGTGGCGCTGCTGGATCACGACACCAACCCCGCCTCGCTGGTGGGGGGGCCGGATGCCTGGTTCGAGCAAGCCGAAGAATTG CTGCTCGGCACCTTGGACAGCGGCGCGACCTTTGAAGGCTTCAACGAGGGCCTCGACCGTTTGGGCGTGCCGACCACGGAACCGCGCGCGCTCGACAGCC GTTTTGCCGGCCTGCAACGCGTCGCCGCGACCGTGCCCCAAGGGCGGCTGGCTGCGCTGGCCGAACAGGCCTGCGAAGGCGCCAGCCTGTGGTGGGGCCG AGGCTCGCAACAGATTTCTCCTGGTTTATTGCGGTGTCAGGGCCTGCCTGCCGCCAGCGATTTTGCGCAGTTTTTGCTCGGACAAGAAGGTGTGGTGTAG
|
|
DNA Sequence for Gene |
>ABX75_RS08975
ATGGGGTCGACGTACAAATCCGCGAGCAAAAGCCATGTGGGCATGGTGCGCCAGGTCAACGAAGACGCCTGCCTGGACCTGCCGGAGAACCGCCTGTGGG TGGTGGCCGACGGCATGGGCGGGCATGCGGCGGGGGATTATGTCAGCAGCCTGATTGTCGACAGCCTGCGCAATGTGCCGCTGGGGCGCTCGCTGGATGA ATACACGGCAGCGCTGCGCAATGATTTGGTGCGCATCAACGCCGCCGTGCGCGAAGAGACCGCCCACCGTGGCGTGACCATGATGGGCAGCACCGTGGTG CTCCTCGCCGCTCGTGGCCTGCGTGGCGTATGCCTGTGGGCCGGCGACAGTCGCCTGTATCGCCTGCGCGATGGTGTGCTCGAAGGCATTTCCCGCGACC ACAGCTACGTGCAAGACCTGCAAGACAGCGGCCTGCTCAGCGAAGCCGAAGCCCGTGTGCATCCGCGCGCCAACATCGTCACCCGCGCCATCGGCGTGGA AGCGCACCTGAACCTGGCGACAGTCGACCTGTTAATCGCCCCAGGGGACACCTACCTGCTGTGCAGCGACGGCCTCAACAAAACCGTCGAAGACCATGAG ATCCGTGAAGTGCTCGGCCATGACACGCCGGATGAAATCGTGCGCAGCCTGGTGCACCTGGGCCTTAACCGCGGCGCCCCGGACAACATCACCGCCATCG TCGTGAAGGTATCGGCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ACATCCTGATTCCGGGTTATGACATCGAAGGCGAGATCGGCGAAGGCGCCATGGCCAGCGTGTACCTGGCGACCCAGCGCTCGCTGGAGCGCAAGGTGGC GTTGAAGGTAATGGCAGCGGCCCTGGCGGCCGACCCGAGCTTCTGCGAGCGTTTCCTGCGCGAGGGCAAGACCCTGGCGCGCCTGTCCCACCCCCACACC GTGACCATCCATGACATCGGCAATGTCGGTGAGCTGTACTACATGGCCATGGAATACCTGCCCAACGGCACGCTCAAAGAGCGCATCGCCGCCGGCATGA CGCCTGAGCAGGGCGTGACGTTGATTCGCCAGATTGCTTCGGCCTTGGGTTACGCCCATGCCCAGGGCCTGGTGCACCGCGACGTCAAACCGGCGAACAT CCTGTTTCGCGCCGATGGCACGGCGGTGTTGTCGGACTTCGGCATCGCCAAGTCCCTGGACGACCGCACCCAATTCACCCAGGCCGGTTTCGCCGTGGGC
|
|
Amino Acid Sequence |
>serine/threonine phosphatase
MGSTYKSASKSHVGMVRQVNEDACLDLPENRLWVVADGMGGHAAGDYVSSLIVDSLRNVPLGRSLDEYTAALRNDLVRINAAVREETAHRGVTMMGSTVV LLAARGLRGVCLWAGDSRLYRLRDGVLEGISRDHSYVQDLQDSGLLSEAEARVHPRANIVTRAIGVEAHLNLATVDLLIAPGDTYLLCSDGLNKTVEDHE IREVLGHDTPDEIVRSLVHLGLNRGAPDNITAIVVKVSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|