Strain | Pseudomonas sp. ARP3 contig5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAAGTTGCTCAAGCCGCTGGGTATCAAGGCCCCGGTGTACCCACTCAAGGGGTACTCGCTGACTGTGCCGATCACCAACCCGGCGATGGCGCCCACGTCG ACCATTCTCGACGAGACCTACAAGGTCGCTATCACCCGTTTCGACAACCGCATCCGCGTCGGCGGCATGGCTGAAATAGCCGGTTTTGACCTGTCGCTGA ACCCGCGTCGCCGGGAAACCCTGGAGATGATCGTCAACGACCTTTATCCTCAGGGCGGTGATTTGGCCCAGGCTTCGTTCTGGACCGGCCTGCGTCCAAC TACACCTGACGGCACGCCGATTGTCGGTGCCACGCCGTTCAAGAACCTGTTCCTGAATACCGGCCACGGCACGCTCGGTTGGACCATGGCCTGCGGCTCG GGCCGTTTGCTGGCCGACCTGATGGCCAAGAAAACCCCGCAAATCAGCGCCGCAGGCCTCGATATTTCCCGTTATGGCAACCACCAGGAGTCCGCAAAAC
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DNA Sequence for Gene |
>ABX75_RS08765
ATGTCAATCCAGCGCCAGCTCATCAATGAGCGCATGAGCCAGATCGTTGTCCACAGCGGTACCGTGTACCTGGCTGGGCAAGTCGGCGACGACATGGGCG CCGGGATTGAACAGCAGACCCGTGAAACCTTGGCCAATATCGAGCGTTTGCTGGACCTGGCCGGTACCGACAAGACCCGATTGCTGTCGGTGACGATTTA TTTGAAAGACATCGACGCCGATTTCGCCGGTATGAACGCGGTGTGGGACGCTTGGTTGCCCAAAGGGGTTGCCCCGGCCCGCGCCACGGTTGAGGCCAAG CTGTGCGAGCCGCAAATCCTGGTAGAACTGTCCGTCGTGGCTGCTCTGCCGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TACAGATCCCTCTCCCGGCGCTGAGGTTTGTTGATCAGCGCCGGTTTTTCTTCACTCTGCCGCCTAGAAGCCTGCCGTCATGCGTCCAGCCCGTGCCCTG ATCGACCTCCAAGCCCTGCGCCACAACTACCAATTGGCCCGTGAAGTCACGGGAGCCAAGGCACTTGCCGTGATCAAGGCCGATGCCTATGGCCACGGTG CCGTACGTGTGGCCCAGGCGCTGGAAGCCGAGGCCGACGGCTTTGCCGTAGCGTGCATCGAGGAAGCTTTGGAACTGCGTGCCGCTGGCATTCGTGCGCC GGTGCTGCTGCTGGAAGGCTTTTTTGAAGCCGACGAGCTGCCACTGATCATCGAGCATGATTTCTGGTGCGTGGTGCACTCGCTGTGGCAACTGGAGGCG ATCGAACAGGCGCGCTTGAGCAAGCCGCTGACCGTCTGGCTCAAGCTGGATTCGGGTATGCACCGCGTGGGCTTGCACCCTAAGGATTATCACGAGGCTT
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Amino Acid Sequence |
>cytochrome C2
MSIQRQLINERMSQIVVHSGTVYLAGQVGDDMGAGIEQQTRETLANIERLLDLAGTDKTRLLSVTIYLKDIDADFAGMNAVWDAWLPKGVAPARATVEAK LCEPQILVELSVVAALP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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