Pseudomonas sp. ARP3, ABX75_RS08695
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. ARP3 contig5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGTGGTTAGCTGGCGCCGCAACGGCATAGCCGAGGCGACGACGCGTTACAAAGCCAGGCACTGCGCTTAGACTTGAGACGGGTTTGTTTTCCTGGGGCA AGTCCACCAATTCGGGAGAGAGTTTTCATGAAGCTAGTCACTGCCATCATCAAGCCGTTCAAGTTGGACGATGTACGCGAGTCGTTGTCCGAGATCGGCG TGCAGGGCATTACCGTTACTGAGGTCAAAGGCTTCGGTCGGCAGAAGGGTCACACCGAGCTGTATCGCGGCGCGGAATACGTAGTGGATTTCCTGCCGAA GGTGAAGATTGATGTCGCCATTGACGACAAGGATCTTGACCGGGTTATCGAGGCGATAACCAAGGCCGCCAACACCGGCAAGATCGGTGACGGCAAGATC TTCGTGGTCAATCTGGAACAGGCTATTCGCATCCGTACCGGCGAAACCGATACCGACGCAATCTAAGCCGCCAAACCCCAACGCCCCAGGAGAAAACAAT
|
|
| DNA Sequence for Gene |
>ABX75_RS08695
ATGACTCTGCGTAAATTCGCAGGGCTCGGAGCCCTGTTGTCCATCGTAATGCCAAGCCTGGCCATGGCGGCAGACGAAGTGGCTGCTCCAGTCCTCAACT CCGGCGACACCGCGTGGATGCTGACATCCACTGCGCTGGTGCTGTTCATGACCATCCCTGGCCTGGCGCTGTTCTACGGCGGCATGGTTCGCTCCAAAAA TATTCTGTCGGTGATGATGCAGTGCTTTGCCATCACGGGCCTGATCAGCATCCTGTGGGTTATTTACGGCTACAGCATCGCGTTCGATACCACTGGTATG GAACAGGGCGTGGTCAACTTCAATTCCTTCTTCGGCGGCATGGGCAAGGCGTTCCTGGCGGGTGTCACCCCGGCCAGCATCACCGGGCCGGCGGCGTTGT TCCCCGAAGCGGTGTTCATCACCTTCCAGATGACCTTCGCGATCATCACCCCGGCACTCATCGTCGGCGCCTTTGCCGAGCGCATGAAGTTCTCCGCCAT GCTGATCTTCATGGCCATCTGGTTCACTCTGGTCTACGCACCGATCGCACACATGGTGTGGAGCGGCAACGGCGGCCTGTTGTGGGACTGGGGCGTGCTG GACTTCGCCGGCGGCACCGTGGTGCACATCAACGCCGGTGTCGCGGGCCTGGTGGCGTGCATCGTGCTCGGCAAGCGTAAAGGCTACCCGACCACGCCGA TGGCGCCGCACAACCTGGGTTACACCCTGATCGGCGCGGCCATGCTGTGGATCGGCTGGTTTGGTTTCAACGCCGGTTCCGCGGCGGCCGCCAATGGCAC CGCCGGCATGGCGATGCTGGTGACTCAGATCGCCACCGCTGCTGCGGCGCTGGGCTGGATGTTCGCCGAGTGGATTACCCACGGTAAGCCAAGCGCACTG GGCATCGCTTCGGGTGTGGTCGCTGGCCTGGTTGCCGTTACGCCAGCTGCCGGCACCGTAGGCCCGATGGGCGCCCTGGTGATTGGCCTGGTGGCCGGTG TGATCTGCTTCTTCTGCGCCACCAGCCTCAAGCGCAAGCTGGGCTATGACGACTCCCTGGACGCCTTCGGTGTGCACGGTATCGGCGGTATCGTCGGTGC GATCCTCACCGGTGTGTTCGCAGCCCCTGCGTTGGGCGGCTTCGGCACCGTGACGGACGTAGCGGCACAGGTATGGATCCAGTGCAAAGGTGTGGGTTTC ACCGTGATCTACACGGCGATCGTCACCTACGTCATCCTCAAGGTGCTGGACATGGTCATGGGCCTGCGTGTCACCGAAGAGGAAGAGGCGGTTGGCCTCG ATCTGGCGCAACACAACGAGCGCGGCTACAACTTGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTACGCGAAAAAAAGATGCCCGGCTTGCCGGGCATTTTTTTGTCTGGCGTTTGTCAGTCATAGGGCGCCAGGCCATTTTTGTGCAGTGATTGTGATGGGG CGCACACGGCATTTTTCAGCGTGCGAATGTCTTACAGGCATGTAGGCGTATTCGACACTTTGTTTTTTCCCAGAGCGCGCTAGAATGCGCGCCGATGGGC GGAGAACTGTATGTGGCAACAGACCCTGATTACCCTGCGGGCCAGGCCCCGGGGCTTTCACCTGGTGACCGACGAATTGCTTGCCGGCTTGCCTGAATTG AAGGCATGTCGTGTAGGACTGTTGCACCTGTGGCTGCAGCACACTTCGGCTTCGTTGACTATCAACGAGAACGCCGACCCGGCGGTTCGCCGTGACTTCG AACGTTTTTTCAACTCGCTGGTACCACAAGGCCGTGCAGGGTTCGAACACAACGACGAAGGTCCGGACGATCTGCCGGCGCACTTCAAGGCCAGTCTCCT
|
|
| Amino Acid Sequence |
>ammonia channel protein
MTLRKFAGLGALLSIVMPSLAMAADEVAAPVLNSGDTAWMLTSTALVLFMTIPGLALFYGGMVRSKNILSVMMQCFAITGLISILWVIYGYSIAFDTTGM EQGVVNFNSFFGGMGKAFLAGVTPASITGPAALFPEAVFITFQMTFAIITPALIVGAFAERMKFSAMLIFMAIWFTLVYAPIAHMVWSGNGGLLWDWGVL DFAGGTVVHINAGVAGLVACIVLGKRKGYPTTPMAPHNLGYTLIGAAMLWIGWFGFNAGSAAAANGTAGMAMLVTQIATAAAALGWMFAEWITHGKPSAL GIASGVVAGLVAVTPAAGTVGPMGALVIGLVAGVICFFCATSLKRKLGYDDSLDAFGVHGIGGIVGAILTGVFAAPALGGFGTVTDVAAQVWIQCKGVGF TVIYTAIVTYVILKVLDMVMGLRVTEEEEAVGLDLAQHNERGYNL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|