Pseudomonas sp. ARP3, ABX75_RS27050

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. ARP3 contig37, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGTGGTGTTCCTGTGCCTTGCGGCACTGTACGAGAGCTGGTCGATCCCGATTGCGGTGGTGTTGGTAGTGCCCCTGGGCGTGGTGGGTGCGTTGATCG CCACCAGCATGCGCGGGCTGTCCAACGACGTGTTCTTCCAGGTGGGCCTGTTGGTCACGGTGGGTCTGGCGGCGAAAAACGCCATCCTTATCGTGGAGTT TGCCAAAGAGCTTCACGAACAGGGTAAAGGCATCGTCGAGTCGGCTATCGAAGCGTCTCGCATGCGTCTGCGGCCGATCATCATGACCTCCATGGCGTTC ATCCTCGGCGTACTGCCCCTGGCGATCTCCTCAGGCGCCGGTTCAGGCAGCCAGCACGCCATCGGTACCGGCGTCATTGGCGGCATGATCACCGCCACTG TCCTGGCGATCTTCTGGGTGCCGCTGTTCTTCGCTACCGTGTCGGCCATCGGCAACCGCAAAGAACCCGAAACCAAGCAAACTTCTAACGAGGCTGGCCA
DNA Sequence for Gene
>ABX75_RS27050
ATGAGCAAGTCGCTACTTTCCCTAGCCGTCACAGCCTTCGTGCTCAGTGGCTGCTCGCTGATCCCTGACTACCAGCGCCCCGACGCGCCGGTAGCAGCGC AGTACCCGCAGGGGCCGGCGTATTCGTCGGCCCAGGCGCCGGGTCAGGCTGCCGCCGAGCAAGGCTGGAAGCAGTTTTTCCATGACCCTGCCCTGCAACA GCTGATCCAGACCGCACTGGTGAACAACCGCGACCTGCGTGTCGCGGCCCTGAACATCGATGCCTACGCTGCGCAGTACAACATCCAGCGCGCCGACCTG TTCCCGGCCGTTTCGGCCACGGGCAGCGGTGAGCGCTCGCGCACCCCGGCTCGCCTGTCGCAGACCGGCGAATCGAGGATCGCCAGCCAGTACTCGGTCG GTCTCGGGATCAGCTCCTACGAGCTGGACCTGTTCGGTCGCGTGCGCAGCCTGAGTGAAGAAGCCCTGCAAAAGTACTTCGCCACCGAAGAAGCGCGGCG CAGCACTCAGATCAGTCTGGTGGCCAGCGTGGCTAACGCCTACCTGACCTGGCAGGCCGATAAGGAACTGCTCAAGCTGACCCAGGACACCCTCGCCGCG TTCGAGCAGAGCTACAAGCTGACTTCGCGTAGCAACGAAGTCGGCGTGGCCTCGGCCCTGGACCTCAGCCAGGCGCGCACCTCGGTGGAAAACGCCCGGG TGTCCCTGGCCCGCTACACTCGCCAGGTGGCCCAGGACGAAAACAACCTGACCCTGCTGCTGGGCACCGGCCTGCCGGCCAATCTGGCCAGCCAGCCGCT GTCGGATGACCTGCTCAGCGAAGTGCCGGCCGGCTTGCCGTCGGACCTGCTGCAACGTCGCCCCGACATTGTGCAGGCCGAGTACAACCTCAAGGCCGCC AACGCCAATATCGGCGCAGCCCGTGCGGCGTTCTTCCCAAGCATCAGCCTGACCGCCAGCGCCGGCACCGCCAGCCCGAACCTGGGCGGCTTGTTCAAAG GCGGCTCGGGCACCTGGTCGTTCGCGCCGCAGATCAACATCCCGATCTTCAACGCCGGCAGCCTGCGCGCCAGCCTGGACTACTCGAAGATCCAGAAAGA GATCAACGTGGCGAACTACGAGAAGGCGATTCAGACCGGCTTCCAGGAAGTCTCCGACGGCCTCGCCGCGCGGGCGACCTACAAGCAGCAATTGGAAGCC CAACGCGGTTTCGTCGAGGCCAACCAGGATTACTACCGCCTGGCGGAGCGTCGCTACCGCATCGGTGTGGACAGCAACCTGACGTTCCTCGATGCACAGC GCCAACTGTTCAGCGCGCAACAATCGCTGATCACCGACCGCCTCGCGCAGTTGACCAGCGAGGTCAACCTGTACAAGGCCCTCGGCGGTGGCTGGAACGA GCAGACTGCAAAGAATGAACCGCTGAAAGAAGAAGCGCCGGCGTTCAAGGCGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAACGCCGTCGTCAAGAAAAACGCCTCCCTGACAGGAGGCGTTTTTTTATGCGCGTTTATCTCTGTATCTGCCCGGACGTTAAGATCTCTCCTATATCTT TTCCGAAGCTCATGAGTTTTCCTCCCTCGCGTGCTTCAACATCTACTGTGACCACCCCCAACTACGCCCTGAAAAGTCCGTGTTCGACTGTCAACCCTGA CAGTAGACACCCCAGTGGTGAAACGTAAGGTTGAAAGGTTGAGCATCCCGTTCGCGACGACAAACACCGCCAGCCCGCTCGGGTCAGCGGCCACCGTCTT GCTTTGCGTTCAGCCTTTCGGGAAAATTGGTTACAGATTCTTACAGACCACAGAGGGAGCTTGTCGTAATGATCGTAGGAATCGACCTGGGGACGACCAA CAGTCTCGCAGCGGTCTGGCGCGGTGATGCCGCCGAATTGGTGAGCAATGCCCTTGGCCAATTGCTCACCCCGAGCGTAGTCGGGCTGGATGATCAGGGG
Amino Acid Sequence
>adeC/adeK/oprM family multidrug efflux complex outer membrane factor
MSKSLLSLAVTAFVLSGCSLIPDYQRPDAPVAAQYPQGPAYSSAQAPGQAAAEQGWKQFFHDPALQQLIQTALVNNRDLRVAALNIDAYAAQYNIQRADL FPAVSATGSGERSRTPARLSQTGESRIASQYSVGLGISSYELDLFGRVRSLSEEALQKYFATEEARRSTQISLVASVANAYLTWQADKELLKLTQDTLAA FEQSYKLTSRSNEVGVASALDLSQARTSVENARVSLARYTRQVAQDENNLTLLLGTGLPANLASQPLSDDLLSEVPAGLPSDLLQRRPDIVQAEYNLKAA NANIGAARAAFFPSISLTASAGTASPNLGGLFKGGSGTWSFAPQINIPIFNAGSLRASLDYSKIQKEINVANYEKAIQTGFQEVSDGLAARATYKQQLEA QRGFVEANQDYYRLAERRYRIGVDSNLTFLDAQRQLFSAQQSLITDRLAQLTSEVNLYKALGGGWNEQTAKNEPLKEEAPAFKAF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site