Pseudomonas sp. ARP3, ABX75_RS26770
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. ARP3 contig35, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TATTTGTACTGGACATGGGGGAACCGGTAAAAATCGTCGAACTGGCAGAAAAGATGATTCATCTGTCCGGTCTGAGCATACGCTCGGACAAAAACATCCA CGGTGATATTGCGATTGAATTTACCGGCTTACGTCCCGGCGAAAAACTTTATGAAGAGTTACTCATCGGTGACAACGTGGTCGCCACTCGACACCCTATG ATCATGAGTGCAAATGAGGATCATCTCCCATGGGAGATATTGAAAGTCAGGTTGGCCGAGTTGCTATCGGCCTTAGATCAGGACGATTACGTTAGTGTCC GCTTACTGCTGCGAGATACTGTCAGCGGTTACACCCCGGATGGTGAAATTGTAGACTGGATTCATCAGCAACGCCGACTTGATCCCTGAGCTCACACCCA GTTACGTACTCACTTTTGACACCCTCCAGCCATCGACTAAGTTAGAAAAGCAGCTTCGGAAAAGCTGCTTTTTTCTAAACGATGTCATGGAGCTTCACCA
|
|
| DNA Sequence for Gene |
>ABX75_RS26770
ATGCAAAACACCTATATCTCCTCCCTTGTTTTCGCTTTCCTCACCACTCTCTCCCTAGCCACTACAGCAGCCCAGTCAGTCAAACCCGCAGCCCCAGGCC CGATCACCGCGCTGATTACCCAGGTCGAGCAGTCCGCCAAGGTGAACCTTAATGCCGCCGATGCCGAAACCCTGCGCCGCGATCTTTTCGGGGTCGGTGC TGCCAAAGCCAAGGCTATTGTCGCTTACCGTGAAACCAATGGTCCGTTCACTGCGGTGGATGAGCTGCTGGAAGTGAAGGGCATCGGCAAGGCGTTGCTG GAAAAGAATCGCGATAGGCTGGAAATCAAATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCACCCGAAGGCCGGTCATTAACCGGCCTTCTTCCATTGTTCATCGGAAAACTAACCCTCCCGATGTACATAATCCACATTTTCGCCATCGGCAATGGAC CTCATCGACAGCCGATACTGGCACAAATATTGTGTACCTCTACACAAAAGATTGTTCAACAATCCCGAGGTACTTATGCCAGCAAACTTGTCTCTAGCCG ACCAAATCGCGCTGGAACTACGGGCCGATATTATTGGTGGCCGACTCTTGCCTGGAATGGGCTTGGTCGAGGCCGAGTTGGTCAAGTCTTATAACGCCTC GCGCAATACAATCCGCGAAGCCCTGCATCGCTTGGGCCAGGAAGGGCTGACACGCTATGTGCGCAATAAGGGCGTTATGGTCCGGCGGCTGGCACGAGAG GAGGTGCGTGATTTGTTTGTGGTCCGTCGTACTTTGGAGTTGCAAGCTATCGCCCAAAGTGCTGCGCTCACTCGTGAGCAATCCGAGCACATGCAAAACG
|
|
| Amino Acid Sequence |
>competence protein ComEA
MQNTYISSLVFAFLTTLSLATTAAQSVKPAAPGPITALITQVEQSAKVNLNAADAETLRRDLFGVGAAKAKAIVAYRETNGPFTAVDELLEVKGIGKALL EKNRDRLEIK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|