Pseudomonas sp. ARP3, ABX75_RS04475

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. ARP3 contig3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGGTAGCGGTTGTTCAGCTCCAGCTCGATCTGGACCTGCGGATAGCGCTCAGTGAACTCCAGCAGCACGCCATCGAAGAAGGTTTCCCCCAGGGAAACA GGCACCGTCATGCGCACCGGCCCCGCCAGGTCGTCCTTGAGTCGCGCCAGGGCCTGACGCGCCCGCTCCACCTGCACCACCAAGGCCTGGGCCTGAGGTA GCAACGCCGCGCCGGCGGCCGTCAGGCTGAGCCGGCGTGTGGTGCGGTGCAGCAACACCACGCTGAACTGCGCTTCCAGCTGGCTGATGCGCTTGGACAG TTGCCCCTTGCTGCAACCCAGTTGTTCGGCAGCCAACGTAAAACTGCCCGCTTCGATCAACACGGCGAAGGCCGCCAGGTCATCCATTTCGCTCATGGAT TGTTTCCATTTGAAAACCAAAGGTTGCCTATTAGCGCGTTTATCCCATGCAAAAGCCAGCCTAGACTGGCCCTTCAATCAGCCCTTGAAGGAATAGCAAC
DNA Sequence for Gene
>ABX75_RS04475
ATGAAAATCCTATTGATTGGCGCCAACGGCACCGTCGGTTCAGCCGTCAAGGCGGAGCTGGCTCAGCGTCACGAGGTGATCAGCATCGGTCGCAACAGCG GCGATTTCCAGGTGGACATCAGCGACAGCGCTTCCATCCGCAAGCTGTTCGAACAGACCGGCAACTTCGACGCCCTGATCTGCGCCGCCGGCAGCGTGAA CTTCGTGGCGCTGGGCGAGATGCAGGACAGCGACTTCGAACTGGGCCTGCGTGACAAGCTCATGGGCCAGGTCAATCTGCTGCTGATCGGTCGCGAGTAC GCCAACGATGGCGCCTCCTTTACGTTCACCAGCGGCATTCTCAACCGCGACCCGATTCGTACCGGCGCTTCGGCGGCCTTGGTCAACGGCGCAATCGATG GGTTTGTCAAAGCCGCCGCGATCGAATTGCCGCGCGGTCTTCGCGTCAACTCCGTGAGCCCGACGGTGCTGGTGGAAGCCATGGGCAGCTATGCCCCGTA CTTCCGTGGCTACAAGCCGGTCACCGGTGCCGATGTGGCATTGGCCTACGCAAAAAGTGTCGAAGGCTTGCAGACCGGCCAGACCTTTATCGTGGGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTGTAGCGTCTGTCAGAACTGCCTGAAGCTGGCGAGTGGGCTTGTGATGCAACGCCAGCCTGCGTAACGTGGCGGCACTTGCCTGGAGACCCTTTATGCG TGCCGCCCGTACCTTTGCCCTGTTCGCCTTGCTTCCTTTGTTCGCCGCTTGCCAGATGTTTGAAAGCGAGCCAGCCAAACCCTCCCTCGCCGGGTTGACC CGCATGCAGGGCGAAATCACGGCCGATGGCGGCAAACTGCTGTTCCAGCCGTGCAACGACAAGCGCACCTACGTGGTCAAGGACACCGGAGGTACCAGTA TCCTGCAGGAAGCGGCAGCGCTGGCCGGACAGCAAGGGGCTTTGTTTGCCGACTTGCGTGGCAAGTTTTCCGGCGTGGCGGCCGGCGCCCAGGGCGAAGT GGAGCTGCAGCAGCTGTACCGCGTGGAACGTTCCACCGACGCCTGCAACGACCCGGACTTCAAACGCATGATCCTGCGCGCCAACGGCCACAAGCCGGCC
Amino Acid Sequence
>short-chain dehydrogenase
MKILLIGANGTVGSAVKAELAQRHEVISIGRNSGDFQVDISDSASIRKLFEQTGNFDALICAAGSVNFVALGEMQDSDFELGLRDKLMGQVNLLLIGREY ANDGASFTFTSGILNRDPIRTGASAALVNGAIDGFVKAAAIELPRGLRVNSVSPTVLVEAMGSYAPYFRGYKPVTGADVALAYAKSVEGLQTGQTFIVG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site