Pseudomonas sp. ARP3, ABX75_RS25115

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. ARP3 contig29, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGGCTCGCCTGAGCCCGTGTTTTCTATGCCCGGAGATTCTCGGCGACATATGTAGCCGCAAGGCTAATTTTTTTGTATTAGGAGCGTCTAGCCCATGAG TATGCAGGACCCGTTAGCGGACATGCTAACTCGTATCCGTAATGCCCAGATGGCTGAAAAGTCCGTCGTAAGCATGCCATCTTCCAAGTTGAAGGTAGCT GTTGCCAAAGTCCTGAAAGACGAAGGCTACATTGCGGGTTATCAGATCAGCAGCGAAACCAAGCCACTGCTGTCCATCGAGCTGAAGTACTTCGAAGGCC GTTCGGTCATCGAGGAAGTGAAGCGCGTTAGCCGTCCAGGCCTGCGTCAGTACAAGTCCGCTGAAGATCTGCCGAAAGTTCGTGGCGGTCTGGGCGTGTC TATCGTCTCCACCAACAAAGGTGTGATGACGGATCGTGCTGCGCGCGCTGCCGGTGTCGGCGGCGAAGTTCTTTGCACTGTGTTCTAAGGGGGGATAAGC
DNA Sequence for Gene
>ABX75_RS25115
ATGTCTCGCGTCGCTAAGAACCCCGTTAAGCTGCCAGCCGGTGTCGAAGTCAAATTCGCAGGCCAACAGCTTTCGGTGAAGGGTGCCAAGGGTACTCTTG AACTGAACATCCATTCGTCCGTTGAGATCGTTGAAGAAGCTGGTGAGCTGCGTTTCGCTGCTCGCAATGGCGATCAACAGACTCGCGCAATGGCCGGTAC CACGCGTGCGTTGGTGAACAACATGGTCCAAGGCGTAAGCCAAGGCTTCGAGCGTAAGCTCCAGCTGGTCGGTGTTGGTTACAAAGCGCAAGCAAAAGGC ACGGTTTTGAACCTGGCCCTTGGCTTTTCGCACCCAGTGGATTACGAACTGCCGGAAGGCATCACCGCTGAGACTCCTAGCCAGACCGATATCCTGATCA AGGGCATCGATAAGCAGCTGGTAGGTCAAGTGGCTGCTGAGATCCGCGACTTCCGTCCACCAGAGCCGTACAAAGGCAAAGGTGTGCGCTACGCGGACGA AGTCGTCCGTCGTAAAGAAGCCAAGAAGAAGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCATAGCAAATGACCGACAAAAAAGTTACTCGACTGCGTCGCGCTCGCAAAGCACGCCTGAAAATGCACGAACTCGAAGTCGTGCGTCTCTGCGTGTTC CGCTCGTCGCAGCACATCTACGCCCAGGTCATCTCGGCCGACGGCAACAAAGTCCTGGCAAGCGCCTCGACTTTGGATAAAGAACTGCGTGATGGTGCCA CTGGCAACATCGACGCGGCCACAAAGGTTGGCCAGCTGGTCGCTACGCGTGCTAAGGCCGCTGGCGTCTCGCAAGTGGCTTTCGACCGCTCTGGCTTCAA GTACCACGGCCGCGTTAAAGCGTTGGCTGATGCTGCTCGTGAAGCTGGGCTGGAGTTCTAAGTTATGTCAAATAACGACCAAAAGCGCGACGAAGGCTAC ATTGAGAAGCTGGTTCAAGTTAACCGCGTAGCCAAAACCGTTAAAGGCGGCCGTATCTTCACTTTCACCGCGTTGACCGTGGTTGGTGATGGTAAAGGGC
Amino Acid Sequence
>50S ribosomal protein L6
MSRVAKNPVKLPAGVEVKFAGQQLSVKGAKGTLELNIHSSVEIVEEAGELRFAARNGDQQTRAMAGTTRALVNNMVQGVSQGFERKLQLVGVGYKAQAKG TVLNLALGFSHPVDYELPEGITAETPSQTDILIKGIDKQLVGQVAAEIRDFRPPEPYKGKGVRYADEVVRRKEAKKK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site