Pseudomonas sp. ARP3, ABX75_RS03055

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. ARP3 contig2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCGACGGCGCGTTCCTGGACCTGGACGGCATCGGCCAGGCATTGCACACCGCTTTGCTCAAGTTGCAGACGAGGGTTCGGCGCGCAGCGGTCGCAGTGA GCGGGCCATCGGTCATTACGCGACTCATCGAGCTGGAGGCGGGGCTTACTGACGAAGCGATGCTGGCGATGGTCGAGCGGGAGGCCGAGCAGTACATTCC TTATCCACTGGATGACATGGCCATCGACTTTCTAGTCCAGGGGCGCTCGGTCCAGAAGGCGGAGCGGGTCGAGGTGTTGCTGGCGGCATGCCTGAAGGAG CATGTCGAAGCGCGCGAGGCGGTTTTGACCATGGCGGGGCTCATACCGGCGGTGGTCGATGTTGAAGCGTTTGCATTGGCGCGCGCGAGCAGTCAGGATT TCGCCAGCTTCACGCCGTGCAATCGCGTCGATGGCGCACAATGGGCCGTAGATGGCCAAGGGATGGGAGTTGCTTGCGGGCTGGCCCTGAGGAGTTTCGC
DNA Sequence for Gene
>ABX75_RS03055
TTGAAGACACGAATCAACCTTTTGCCCTGGCGCCAAGCCCAGGCTGAACGACGCCGTCACTATTTTGTGGCGCTGCTTCTGGCGTTCGTGTGCATGGCGT TGGTTGTCGTGTGGTTGGCGGATCAGGTGATTGACCAAGCGATCGATCGGCAGGTGACGCGCAATAACCACCTGGGAAATGACATAGCCACTCAGGATTC CAGTATCAAGACCCTTGGCGACCTAGAGGCGCAAAGCCAGCAACTGGCTGAGCGGATGAAGGTCGTGCAGGACCTGCACAACGGCCACTCATCCGGTGCC CGATTGTTGGATCAGTTGGCCCGTGCGGTGCCCGATGGCGTGCATTTGCATGAGGTCGTGGCCAAAGGCGATACGTTGAGTATCAGCGGCACCGCCGAAT CCAGCCAGGATATCGCCCAATTGATGCGTCGTCTGGAAGCATCGGAGGGCGCCCATGGGGCTCGTTTGCAGCATGTGCGCACCGAAGGCGCGCAAGGCAG CAATGGATTCCAACTGATGGTGCGCCAGGGAGCGTCCTCCGAGGCCCAGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGGCCCAGGCTCGAATTTTCCGCGTTCTCTCACCGTGCTGCAAAATGGCCCCTACCTGGCAAGGTCTTGCTGGGCTGTGCCCTGGGCGGCCTGGTGCT GGCGATGGGTGAGCTGATGCAGCTTGGTCCCGCCCGCGTCCGGTTGCAGCAGGCGCAGGCGCAAGAGATGGCCCTGCAACGGCAGCTCGCGGAATCAGCT GTTTTAGCGTCCGAACTCGAAGAGCGCGCTCGTCAGCTCCAACTCAAGCAGGCCCAGGTCGAGGGGCTGTTGCGACAACTGCCGGGTGGGCCCCAGATGC CAAGCATGCTGGAAGATATCGCCCGATTGGCCTTGGCCAATGGCTTGGTGATCGAGTCCGTGCTCCCCCAGGATGAACAACTGCGCCCTCTGTATGCCGA GCAGCCTGTGCAGATCGGCCTCACTGGCGCCTATCACGACCTCGCCTCGTTCGTCAGTGCCTTGGCTGATCTGTCGCGATTTACCACGGTGCATGAGATG
Amino Acid Sequence
>fimbriae biosynthesis protein
MKTRINLLPWRQAQAERRRHYFVALLLAFVCMALVVVWLADQVIDQAIDRQVTRNNHLGNDIATQDSSIKTLGDLEAQSQQLAERMKVVQDLHNGHSSGA RLLDQLARAVPDGVHLHEVVAKGDTLSISGTAESSQDIAQLMRRLEASEGAHGARLQHVRTEGAQGSNGFQLMVRQGASSEAQP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site