Strain | Pseudomonas sp. ARP3 contig2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGCAACCCGGCGGACCAGCACTCGTTCATCATCACCGAAGAGCTGGCGCCCACGGTCAGCCTGGAAGACTTCAGCATTGATTGGGTCAAGCAGCCACCGC AGCCGCGCCTCAAGCGCGCGCTGATCGCCGAAGTGGCGCGCATGACCGGCATGATGCATCGCGGCGGGGTGAACCATCGTGACTGCTATATCTGCCACTT CCTGCTGCACACCGACACGCCGATCACGCCTGATCGCTTCAAGTTGTCGGTGATCGACCTGCACCGTGCCCAGACCCGGCCGAAAATCAGCCTGCGCTGG CGCAACAAAGACCTGGCCGCGCTGTACTTCTCGGCGCTGGACATCGGCCTGACCCGTCGCGACAAGCTGCGGTTCCTCAAGGGCTACTTCCAGCAGCCGT TGCGCCAGATCCTGGCCGAAGAAAGCGCTTTGTTGCAGTGGCTGCAAGGCAAGGCCGACAAACTCTACGCGCGTAAACAGCGATACGGGGATGCGCTCTG
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DNA Sequence for Gene |
>ABX75_RS02770
ATGGCGGGCTGGAACCTGGAACCGGCCTATGCCGGCCTGGCGGATGACTTTGGCAGCCTCGACGCGGTGTTCGCCCTGCAAGGCGAGCGGCTGACCCGCG ATCCGTTGTCCGAAGTGATCCGGGTAGAGCGCGGTGGGGTCAATTATTATGTCAAGCGCTACGTCGGCGCCGGCAAGGGCTTGCGTCGCTACCTGGGCAA GCCGCGGGTCAAGTCCGAATGGCAGAACCTCAAGCGCTTTGCCAAATGGGGCATTCCCACCGCCGATGTGGTGGCCTGGGGCTTGGAGCGTAAAGGCCTG GCCTATGATCGCGGCGCGATGATCACCCGTGAATTGCCCAAGACCGAAGACCTGTCGGCGCTGGCCGATCGCAACGACCCCCGTCTGCGCGATCCGCGCT GGGTCGATGGGGTCAGCCGCCAGCTCGCCGAATACACCCGCACCATGCACGATCACCGCTTTACTCATAACGATTTGAAGTGGCGCAACCTGCTGATCGA CGACCAGCAGACCCTGTACCTGATCGATTGCCCCAACGGCGATTTCTGGCGCGGGTTCTGGCTCAAGTACCGTATTACCAAGGATCTGGCCTGCCTGGAC AAGGTGGCCAAATATCACCTGTCGGCCACTCAGCGCCTGCGGTTCTATCTGCAATACCGTCAGCGCCAGCACCTGAGTGCATCGGACAAACAGCGTATTC GCCATGTGGTGAAGTTTTTTGAGGGGCGCGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTGATTTTGTGGCGGCTGAAGACCGGGTTTTGTTGGAACGCAACGGTCTGGCCACGTTCGACGCCTTGTGGGCCAAACAGCTCGACGCAGTGGACGAACC GAACACCAGTCGCGGCGGCTGGAGCAGCGTGTTTCGCCTGGAGCTGGAGGGGCAGGGGTATTACCTCAAGCGTCAGAGCAACTACCTGACCCGCAGCCTT CATCGCCCATTGGGCGAGCCGAGTTTCTCCCGCGAGTTTCGCAATATCAGCCGTTACCGCGCGTTGGGTATCCCGGCCTTGCAGGCGGCGTTCTATGGCG AACGCAAAGTGGCCGGCGAGTACCGCGCGATGCTGCTGACCCGTGCCCTTGACGGCTGGAACGACTTGGATTCGCTGCTTGAGCAGTGGCCTTCGCTCAG CGATGCCCAGCACCGCGCTATTCTGCGGGCGTGCGGCGAACTGGCGCGCCGGCTGCACGGCGTCGGCCAGGTGCATGGCTGTTTCTACCCCAAGCATATT
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Amino Acid Sequence |
>heptose kinase
MAGWNLEPAYAGLADDFGSLDAVFALQGERLTRDPLSEVIRVERGGVNYYVKRYVGAGKGLRRYLGKPRVKSEWQNLKRFAKWGIPTADVVAWGLERKGL AYDRGAMITRELPKTEDLSALADRNDPRLRDPRWVDGVSRQLAEYTRTMHDHRFTHNDLKWRNLLIDDQQTLYLIDCPNGDFWRGFWLKYRITKDLACLD KVAKYHLSATQRLRFYLQYRQRQHLSASDKQRIRHVVKFFEGRE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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