Pseudomonas sp. ARP3, ABX75_RS19950

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. ARP3 contig18, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCCAGCAGATAGCCGCGCCGCGCACCCTGTATGAAGAGCCGAAGAACACCTTCGTGGCTAACTTCATTGGCGAAAACAACCGTCTCAACGGTCGCCTGC ACAGCCGCAGCGGCGAACGCTGCGTAGTGGAGCTGGCGCGGGGCGAGAAGGTTGAGGCGCTGGCGGTGAACGTCGGCCAGGTCGGCGGCCCGGTGACGTT GTCGGTGCGCCCGGAGCGCGTCAGCCTCAATGGCTCCAGCGAAAGCTGCGTCAACCGCTTCTCGGGGCGTGTGGCGGAATTTATCTACCTGGGCGACCAC GTGCGGGTGCGCCTGGAAGTCTGCGGCAAGACCGATTTTTTTGTGAAACAACCGATCGCCGAGCTGGACCCAGCCCTGGCAGTCGGCGACGTGGTACCGA TTGGCTGGCAAGTCGAGCACGTTCGCGCACTCGACCCACTTCTAGAGGCGAATTGATCGCCCCCATGGCTTCACCAACCCTGCACGTGGAGAGAACAACA
DNA Sequence for Gene
>ABX75_RS19950
ATGTTGAGATCCCTGAAGTATTCGGCCCTGGCAATTGGCTTGATGGGCGCAACGCACGCCATGGCCGGCCCGGACCTGACCGTCGTGTCATTTGGCGGCG CGAACAAGGCGGCACAGGTCAAGGCCTTCTATGCACCGTGGGAAAGCGCGGGCAACGGCAAGATCGTCGCCGGTGAGTACAACGGTGAGATGGCCAAGGT CAAAGCCATGGTCGACACCAAGAGCGTGTCCTGGGACCTGGTGGAAGTGGAGTCGCCGGAACTGTCCCGCGGTTGCGACGAAGACATGTTCGAGCCCCTG GACCCGAAACTGTTCGGCGACAGCGCGAACTACGTGAAGGGCGCGATCCAGCCGTGCGGCGTGGGCTTCTTCGTTTGGTCGACGGTGTTGGCCTACAACG CTGACAAACTGGCCTCCGCGCCAACCAGCTGGGCGGATTTCTGGGACACCAAGAAATTCCCGGGCAAGCGCGGCCTGCGCAAAGGCGCCAAGTACACCTT GGAATTTGCATTGATGGCCGACGGCGTCGCACCCAAAGACGTCTACAAAGTGCTGGCCGGCAAAGATGGCCAGGACCGTGCGTTCAAAAAGCTCGATGAA CTCAAACCGTCGATCCAGTGGTGGGAAGCCGGCGCGCAACCGCCGCAGTACCTGGCCTCTGGTGACGTAGTGATGAGCTCGGCCTACAACGGTCGTATCG CCGCCGTGCAGAAAGAAAGCAACCTGAAAGTGGTGTGGAACGGCGGTATCTACGACTTCGACGCCTGGGCTATTCCAAAAGGCCTGGCCAAGGACCGCGC CGAAGCGGCGAAGAAGTTCATCGCCTTCTCGGTCGCGCCGCAGCAGCAGAAGACCTACTCGGAAAACATTGCCTACGGCCCGGCCAACACCCAAGCCGTA CCGCTGCTGGCCAAGGACATCCTCAAGGACATGCCGACCACCCCGGAGAACATCGCCAATCAGGTGCAGATCGACGTGAGCTTCTGGGCTGATAACGGTG AGCAGCTCGAACAGCGTTTCAACTCCTGGGCTGCGAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CACCGCATAACCCTGTGGGAGGGGGCAAGCCCCTCCCACAAGGGATTTCTTGTGTGTGAAAGATTGCATTCATTTTCAAGATTCGGAGTCAGCCATGGCC ATCGCCGTTCCCTCGAACGAGGTCAACAGCCCCACCCTCAAGCAGCGCCTGGCGCGTGCCGAGCGGCTCAATCGCTGGAAAGCCCAAGCGTTGATTGCGC CGCTGGTGCTGTTCCTGCTGTTGGTGTTTCTGGTGCCAATCGTCGCATTGCTCTACAAAAGCGTCGGTAACCCAGAAGTGGTAGGCGGTTTGCCGCGGAC CGTGGTGGCGGTGAAAACCTGGGATGGGCGTGGTCTGCCGGGCGAACCGGTGTATCAGGCACTCAGCGAAGATTTGGGCGAAGCGCGCAAAAATCAGACC CTGGGCGATCTGTCCAAACGCTTGAACATGGAACTGGCCGGCTATCGCAGCCTGCTGACCAAAACCGCACGGGCGCTGCCGTTTACCGAAGTGCCCGGGT
Amino Acid Sequence
>spermidine/putrescine ABC transporter substrate-binding protein
MLRSLKYSALAIGLMGATHAMAGPDLTVVSFGGANKAAQVKAFYAPWESAGNGKIVAGEYNGEMAKVKAMVDTKSVSWDLVEVESPELSRGCDEDMFEPL DPKLFGDSANYVKGAIQPCGVGFFVWSTVLAYNADKLASAPTSWADFWDTKKFPGKRGLRKGAKYTLEFALMADGVAPKDVYKVLAGKDGQDRAFKKLDE LKPSIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAVQKESNLKVVWNGGIYDFDAWAIPKGLAKDRAEAAKKFIAFSVAPQQQKTYSENIAYGPANTQAV PLLAKDILKDMPTTPENIANQVQIDVSFWADNGEQLEQRFNSWAAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site