Pseudomonas sp. ARP3, ABX75_RS17145
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. ARP3 contig14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGGGTAAGTTCCAACTATGCGGCCGTGGCCTGTATCGACCTGCCCACCTGCCACGGTCAATGGTGGCCGGCGGCGGACTTTGCCAACGGTTTTCACCTGA CCCAACATATCGGCCCGAACTACCTGGGCGGGCAGCTCGACAGCGAGGCGCGTACGGCGATTCACCTGACCCACCGCTTGGGCGCGGTCATCGTCACCTT GGCCCTGCTCGGTTTGGCCTGGCAACTGCGCGCGGTGGGCATGACGCGACTGGCGGGCCTGTTGCTGATTGCCTTGGCCGCGCAAATCGGCCTGGGCTTG AGCAATGTGTATTTCCATCTGCCGCTGCCGGTGGCCGTGGCCCATAACGCCGGTGGCGCCGGGTTGTTGCTGACGCTGGTGCTGGTCAATTACCACGCGC GTACCAGCCTGGTACGGGTGCGCAGTCAGCGGCCGTTCGGCTGGCGCTTTATCCCGCGCAAACAGATATCGGGCCTGACCACCCTTAAAGGAGAAATGCC
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| DNA Sequence for Gene |
>ABX75_RS17145
ATGGCGACCTTGACCGGCGCGCGGCACGACCAGGCGCTCTGGCGCGACTATCTGGAGCTGACCAAGCCGAAAGTGGTGGTGCTGATGTTGATCACTTCCC TGGTCGGTATGTTTCTCGCGACCCGCGCTGGCGTGCCGTGGACGGTGCTGATTTTCGGCAATCTGGGGATCGCTCTGTGTGCAGGCGGCGCGGCGGCGAT CAACCACGTGGTGGACCGGCGGATCGACGCTGTGATGGCTCGCACCCATAAGCGCCCGTTGGCCCAGGGGCGCGTGCAGCCTGTGGCCGCCCTGGCCTTT GCGTTGGTGTTGTCAGTGGCTGGGCTGACGCTGCTGCTGGCGTTCACCAATCCGCTGGCGGCATGGCTGACCTTGGCATCGTTGTTGGGGTATGCGGTGA TCTATACCGGGTTTCTCAAGCGCGCTACGCCGCAGAATATCGTTATCGGCGGTTTGGCCGGAGCGGCGCCACCGCTACTGGGCTGGGTTGCCGTCACTGG GCATGTCAGCGCCGAACCGCTGCTGCTGGTGCTGGTTATCTTCGCCTGGACCCCGCCACACTTCTGGGCTTTGGCCATTCACCGCAAAGAGGAGTACGCC AAGGCCGATATTCCGATGCTGCCGGTAACCCACGGCGAGCATTACACCAAGGTGCATATTCTGCTTTATACCTTCGCCCTACTGGCAGTGAGCCTGATGC CCTACGTGATCCACATGAGCGGCCCGCTCTACCTGGGTTGCGCGCTGGTCTTGGGTGCGCGCTTTCTGCAATGGGCCTGGGTGTTGTACCGTGGCGGTCG GCCGCACGCGGCGATCAACACCTTCAAGTACTCTATCTGGTACCTGTTCCTACTGTTTATCGCGCTGCTCGTAGACCACTACTTACTGTTGAACCTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTCGAACTCAAAAAACCGTCTTTATCCTGGTGGCCATCGTCGCGTTGATCATGGGCCTGACCGTTAACAAAGTGCTCAACGGCAAAGGCCAGGGCGACCC CACCGCGCTGATCGACGCCGGCATCATCCTGCTGCCGCAAAGCCGCGCGCTGCCGCCGGTGACCATGACCAATCAGGACGGCCAGCCGGTGGTGATCAAT GAATTGAAGGGTAAGTGGAGCCTGCTGTTCTTCGGCTACACCTTCTGCCCGGACATTTGCCCTACCACCCTTGCTCAACTGCGCCAGATCAAGAGCGAAC TGCCCAAGGACGTTGTGGATAAGCTTCAGGTGATCCTGGTGAGTGTCGACCCCAACCGCGACACTCCGACCCAGCTCAAGCAGTACCTGGGCTATTTCGA TCCGCAATTCCAGGGTTTGACCGGCGCAAATGTGGCTGAGGTGCAAAAGGTCTCGAACGCCGTGAGTATCCCGTTCATCCCGGCCGATACCAGCAAGCCG
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| Amino Acid Sequence |
>protoheme IX farnesyltransferase
MATLTGARHDQALWRDYLELTKPKVVVLMLITSLVGMFLATRAGVPWTVLIFGNLGIALCAGGAAAINHVVDRRIDAVMARTHKRPLAQGRVQPVAALAF ALVLSVAGLTLLLAFTNPLAAWLTLASLLGYAVIYTGFLKRATPQNIVIGGLAGAAPPLLGWVAVTGHVSAEPLLLVLVIFAWTPPHFWALAIHRKEEYA KADIPMLPVTHGEHYTKVHILLYTFALLAVSLMPYVIHMSGPLYLGCALVLGARFLQWAWVLYRGGRPHAAINTFKYSIWYLFLLFIALLVDHYLLLNL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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