Pseudomonas sp. ARP3, ABX75_RS16245
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. ARP3 contig13, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCGATCATCTGCGGCAAGGTGATCATCGGCGAGAACGTATTCGTCGGCCCTTACGCCGTGATCCGCGCCGATGAGGTCGACGCCAGCGGCGCCATGGA CCCGATCACCATCGGCGCCAACTCCAATATCCAGGACGGGGTGGTGATCCACTCCAAGTCCGGCGCGGCGGTGACCATCGGCGAGTTCACCTCCATCGCC CACCGCTCCATCGTCCACGGGCCTTGCACCGTGGGCGACCGCGTGTTCATCGGCTTCAACAGCGTGTTGTTCAACTGCGCAGTGGGTGACGGCTGCGTGG TGCGGCATAACTCGGTGGTCGACGGCCGCGATTTACCGGACGCCTTCTACGTACCCTCCACCACCCGCATCGGCCCGCACACCGACCTGTCGCAGTTCCC GCCGGTCAGCATCAGTGCCTCGGAATTTTCCGAAGACGTGGCGCGCACCAATGTCGATCTGGTGCGCGGCTACAAAGCCCTGCAAAACGAGTTCTGAACC
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| DNA Sequence for Gene |
>ABX75_RS16245
ATGAGCCGGCTGCTGATTCGCAACGCACGCTTGGTCAACGAAGGCCAGGTCCGAGACGCCGATGTGCTGGTCGCCAACGGCCGCATCGAAAAGATCGCCA ACAGCATCACCGGCTGTAACGCCGCCGTGGCGATCGACGCGCAGGGCCAGTGGCTGCTGCCCGGCATGATCGATGACCAGGTGCATTTCCGTGACCCCGG TGCGCCGGACAAAGGTAGTTTCTACAGTGAATCGCGGGCGGCGGTGGCCGGGGGTATCACCAGCTTTATGGACATGCCCAACACCTCCCCCGCCACCTTG AACCTGGCGGCCCTGGCCGACAAAAAGCGCCGCGCGGGGCTGCATTCGGTGGCCAACTATGGCTTTCACTTTGGCGTCAGCCACGACAACCTCGATAAGG TCGCCGCTCTCGACCCGCGCGAGGTCGCCGGGGTCAAAGTGTTTATGGGTGCCTCAACGGGCAATATGCTGGTGGACGACCCGCGGATTCTGGAGCGGCT GTTCGCCGAAGTGCCGACTCTTCTGCTCGCCCATTGCGAACACAGCCCCAGCATCCAGGCCAATGAGCAGCGCCTGCGCGCACGCTTCGGCGATGGGATC CCAGCGGTGGCGCACCCGCTGATCCGCGATGCCGAGGCGTGCTATCGCTCGTCGTCTTATGCGGTGGAGCTGGCCAGGCGGTACGGCACGCGGCTACATG TGCTGCACCTGACCAGCGCCCGCGAGCTGGCGTTGTTCGAAGACAAACCCCTGACCGAAAAACGCATCACCGCCGAAGTATGCCTGCACCATCTGCTATT TGATGACCGCGACTATCACCGCCTCGGCCATCAGATCAAATGCAACCCAGCGATCAAGACTCGCGCCGACCGCGACGCACTGCGCCAGGCCTTACTCAGT GATCGTCTGGACGTGATTGGCAGTGACCATGCGCCGCATACCTGGGCACAGAAACAGTTGGGTTATCGCGAGGCGCCGGCGGGCTTGCCTCTGGTGCAGC ATGCGCTGCCGGCGTTGATGGAATTGGTGGCCGATGGGCTATTGCCGTTGACCACGCTGGTGGCCAAAACCAGCCACCGAGTGGCCGATCTTTTCGCCAT CCCGGATCGAGGCTATGTACGCGAAGGCTATTGGGCCGACTTGGTGCTGATCAAACCTGAGCCCCAAGGCAAGCCGGTCAGTGAGGAACCGATCCTGGCC CGCTGCGGCTGGACGCCCTTCGCCGAGCGCCGCTTTCGCCACAGCGTCAGTACCACGTTAGTCTCCGGCCACCTGGCGTGGCACAACGGCCAGGTGGTCG ACAGTTGCCAAGGCTTGCCGCTGTACTTCCAGCGTTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCGCGGCTTGACGGTGCCGCAGTCGTTGCCCAGCCATTGGGCATGGCTGTCCAGGCTGCCCTTTTGTTGCATGCCGGTGGCATTGAAAGTGCCATTGA CGGTGGTGGTGAATTCTTTCTGGCTCTGGAAGGTGGCCACGCCCGTACCCTGGGCTTTGGGGCAACTGAAGCGGAATTTCCACTGGTTGCCGGTCTTGTC GGTCACTTCCTGGCGGCAGCCCGATTGTGGGTCGGTCAGGGGGATCGAATCGGACGCCACCTGCGCCGGCGTCAGACACACCTGCACGCCTTTACCGGCC ATGGTGATGCCCTGTTTTTCCAGCATGGCGCGCTGTTCGGGGGTCATCTGTTGCTTGAGCTGGCCGAGGATCAGCGACAGATCCGGCAGTTCCTGGTTAT CGACTTTCATATTGCTGGTGGTCACTTCCCACAAGCCCGGCGCCAACATCTGGGCCTGCGCCGCCACGGGCAACGACAAACCAACAACCATGGTCATACA
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| Amino Acid Sequence |
>dihydroorotase
MSRLLIRNARLVNEGQVRDADVLVANGRIEKIANSITGCNAAVAIDAQGQWLLPGMIDDQVHFRDPGAPDKGSFYSESRAAVAGGITSFMDMPNTSPATL NLAALADKKRRAGLHSVANYGFHFGVSHDNLDKVAALDPREVAGVKVFMGASTGNMLVDDPRILERLFAEVPTLLLAHCEHSPSIQANEQRLRARFGDGI PAVAHPLIRDAEACYRSSSYAVELARRYGTRLHVLHLTSARELALFEDKPLTEKRITAEVCLHHLLFDDRDYHRLGHQIKCNPAIKTRADRDALRQALLS DRLDVIGSDHAPHTWAQKQLGYREAPAGLPLVQHALPALMELVADGLLPLTTLVAKTSHRVADLFAIPDRGYVREGYWADLVLIKPEPQGKPVSEEPILA RCGWTPFAERRFRHSVSTTLVSGHLAWHNGQVVDSCQGLPLYFQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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