Strain | Pseudomonas sp. AAC Scaffold8, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGAGCACGCAGAAGGACATAGACGAAGCCATCCAGGGCAGCCGGCTGATCCGCAAGATCATGAATGCACCGGCGCTCAAGGCTGTGACTGTGGAAGAGGT GCTGCCGGGTGCGGCGGTGCAGTCCGACGAGGCGATGCTGCAGTACTTCCGCGAGAACTGCGGCTCCATCTACCACCTGTGCGGCAGCTGCGCCATGGGC GCCGACCCGCAGTCCAGCGTGGTCGACAAGCGCCTGCGGGTGCACGGCATCGAGGGCCTGCGCGTGGTGGATGCGTCGATCTTCCCCAACGTCACCTCCG GCAACACCAACGCGGCGGTGATGATGGTGGCGGAGAAGGGCGCCGAGCTGATCCTGGAGGATGCCCGCCAGGTCCGGGCCGAAGTGCCGCAGCGCCTGGC GGTGTAGTAGCGGCCTATTACCCGCCGCGGCGGGGAGTGGCTAACCTGTCTGGCATGCCCGGCCGCCCATGGCCGGGCCTCTGCCCGGAGGAATGCTGCG
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DNA Sequence for Gene |
>FG99_RS27095
ATGGCCGCGAAGAAGATCCTGATGCTGGTCGGCGACTACGCCGAGGACTACGAAACCATGGTGCCGTTCCAGGCGCTGCAGATGGTCGGCCACGTCGTCC ACGCGGCGTGCCCGGACAAGAAGGCCGGGCAGAGCGTGCGCACCGCCATCCACGACTTCGAGGGCGACCAGACCTACAGCGAGAAGCCGGGGCACAACTT CGCCCTCAACGCCGACTTCGCCACTGTTCGCGCTGAAGACTACGACGCGCTGCTGATCCCCGGCGGCCGCGCCCCGGAATACCTTCGCCTGAACGCCAGG GTGATCGAACTGGTGAAAGCCTTCGACGCCGCGAAGAAACCCATCGCCGCCGTCTGCCACGGCGCCCAGCTGCTGGCCGCGGCCGGCGTGCTCAAGGGCC GCTCCTGCAGCGCCTACCCGGCCTGCGGCCCGGAAGTGAAGCTGGCCGGCGGCGAATACGTGGACATCCCGGTGGACGCCGCCCACGTCGACGGCAACCT GGTCAGTGCCCCGGCCTGGCCGGCGCACCCGGCGTGGCTGGCGAAGTTCCTCGAAGTGCTCGGCACGAAGATCAGCCTGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACTGGCGTTCGCGTCTATAGAAGGAGGCAGAGCATGTGCGAACTCTACGTGAAGGCCGACCCTATCCTCTACGAGTCGCGCTCCCGCTCCCTGCGCATCC GCGGCGTGGTCACCACCCTGCGCCTGGAGAACCAGTTCTGGGACATCCTGCGGGAGATCGCCGAAGTGGACGGCATGACCACCAACCAGCTGATCGCTAA GCTCTACGACGAGGTGATGGACTACCGCGGCGAAGTGGTCAACTTCGCCTCCTTCCTGCGCGTGAGCTGCACCCGCTACCTGGCCCAGCGCCGCGACAAC ATAGTGGAGCTGAACCGGGTGCCGCGCAGCGCCTGATCCCCGGCCCTATAGGAGCGGGCCCTGCCCGCGATTTCGCGCGCAGGGCGCGCTCCTACATGGG AATGCCGCAGGTGGCGCTTTTCGTAGGATGGCGTTGAGCGAAGCGATACCCACCAGCGCAACTGAGCCGGGTGCCGCGCAGCGCCTGATCCCCGGCCCTG
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Amino Acid Sequence |
>amidase/protease
MAAKKILMLVGDYAEDYETMVPFQALQMVGHVVHAACPDKKAGQSVRTAIHDFEGDQTYSEKPGHNFALNADFATVRAEDYDALLIPGGRAPEYLRLNAR VIELVKAFDAAKKPIAAVCHGAQLLAAAGVLKGRSCSAYPACGPEVKLAGGEYVDIPVDAAHVDGNLVSAPAWPAHPAWLAKFLEVLGTKISL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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