Strain | Pseudomonas sp. AAC Scaffold7, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCCGGCCAACTGCGGGTGATCGCCGGCGACTACCGCGGCCACCGCGGCCCGGCCCACAGCTTCAGCCCGCTGGATGTCTGGGACCTGCGCCTGAACGCC GGCAAGGCCTTCGAGCTGCGCGTCGAGCCAGGCCGCAACACGGCGCTGGTGGTGCTGCGCGGCAGCCTGCGGCTGAACGGCGGGCAACGGGCGGAGGAGG GCCAACTGGTGCTGTTCGAGCGGCAAGGCGATGCCATCCACATCGAGACCGAAAGCGACGCCCTGGCGCTGCTGCTGTCCGGCGAGCCGCTGGACGAACC CATCGTCGGCTACGGCCCCTTCGTCATGAACAGCCGCGAGCAGATCGAGCAGGCCCTCGACGACTTCCGCCGCGGGCGTTTCGGACAGATGGCCGGCTGA GCGTCACGTGCCGGACTCGGCCAGCGCCTAGTCTGGTTGGATGCCCGCGCCGGAGCGCGCGGGCTGTTCGGGCAGGACGCCCATTTGCGAGGAAACGGAA
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DNA Sequence for Gene |
>FG99_RS24605
ATGAATAACTTCGGCAACGTCGCCAACTTCGACGGCCAGCGCCCGGTGATCGACCCCGACGACACCGCCATGCTGCTGATCGACCATCAGAGCGGGCTGT TCCAGACGGTCAAGGACATGCCCATGACCGAACTGCGCGCCAACGCCATCACCCTGGCGAAGATCACCAGCCTGGCGAAGATTCCGCTGATCACCACAGC CTCGGTGCCCCAGGGCCCCAATGGCCCGCTGATCCCCGAGATCCACGAGGCCGCGCCGCATGCGCAGTACGTGGCGCGCAAGGGCGAGATCAACGCCTGG GACAACCCCGACTTCGTCGCCGCAGTGGAGAAGACCGGCAAGAAGACCCTGGTCATCGCCGGCACCATCACCAGCGTGTGCATGGCCTTCCCGGCGATCG CCGCGGTCAACGCCGGCTACCGGGTGTTCGCGGTGATCGACGCCTCCGGCACCTACTCCAAGGCCGCCCAGGAAATCACCCTGGCCCGCGTGGTGCAGGC CGGCGTGGTGCCCATGGACACCGCCGCGGTGTGCTCGGAAATCCAGCGCACCTGGAACCGCCCCGACGCCGCCGAGTGGGCCGAGGCCTACAGCCACATC TTCCCGCACTACCGCCTGCTGATCGAAAGCTATGCCAAGGCCCAGGCGGTGGTGAGCAACCACGAAACGCTGGATTCGCAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGACACCCCTTGCCCGGCGCGGGCCGGGCGTTTCCCCCAGCAAGAGGAAAGCGCAATGAGCAAGCCCTATGTTCGCCTCGACAAGACCCAGGCCGCCGTG CTGCTGGTCGACCACCAGGCCGGACTGCTGTCCCTGGTGCGCGACATCGAACCGGACAAGTTCAAGAACAACGTGCTGGCCCTGGCGGACCTGGCCAAGT ACTTCAAGCTGCCGACCATCCTCACCACCAGCTTCGAGAGCGGCCCCAACGGCCCGCTGGTGCCGGAGCTGAAGGAGCTCTTCCCCGACGCCCCGTACAT CGCCCGCCCGGGCAACATCAACGCCTGGGACAACGAGGACTTCGTCAAGGCAGTGAAGGCCACCGGCAAGAAGCAGCTGATCATCGCCGGCGTGGTCACC GAAGTCTGCGTGGCCTTCCCGGCGCTGTCGGCCCTGGAGGAAGGCTTCGACGTCTTCGTGGTGGCCGACGCCTCCGGCACCTTCAACGAAGTCACCCGCG
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Amino Acid Sequence |
>nicotinamidase
MNNFGNVANFDGQRPVIDPDDTAMLLIDHQSGLFQTVKDMPMTELRANAITLAKITSLAKIPLITTASVPQGPNGPLIPEIHEAAPHAQYVARKGEINAW DNPDFVAAVEKTGKKTLVIAGTITSVCMAFPAIAAVNAGYRVFAVIDASGTYSKAAQEITLARVVQAGVVPMDTAAVCSEIQRTWNRPDAAEWAEAYSHI FPHYRLLIESYAKAQAVVSNHETLDSQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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