Pseudomonas sp. AAC, FG99_RS24475

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. AAC Scaffold7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATATTTGCGCACGAAAGTGCGCTCGCCCCACAGGAAGGATGTGCCGTGAATTACACCGTAGAGGAAGCACGACGTCTGGTTTCCGAGTCCATGGCGAAGC TCGCCGCACGGCCCGTGAAGGCCACCTATGACCTTGCCACGCTGGGCGCCCGTACCCGTTTGGGCGGTGAAGTCGCTACGGCCAGCACCAGCATGAAAAT CCATGGCTACCCGATCGCCTGCGTGGGCGACCTGGTTCGCTATCCGGACAACACCGAAAGCAGGATCGTCTCCGGTGCCGGTGCGGCGCTCTCTCACAAC GGCCAACCGATGGCCATCGTGGGCAGCGCCACCGACAACGGCGACACCATCGTCAGCAGCTTGCAAAGCTCCGGGCAGATTCGCGAATACGCCGACGATG ACGGCATCCCCGGCCTGCTTCAGCCGGACTACCAGGTTGTAAAGCCTGACTAGCCGACAGCGTTTCGTCCTCCATCTCTGGCTATCGCAAGGAATCGCAC
DNA Sequence for Gene
>FG99_RS24475
ATGAGTGGGAAACCCGCAGCCCGCGTCACCGATCCAACGGCCTGTCCACTACCAGGCCACGGCACCAACCCCATCGTCAGCGGCTCGCCTGACGTTATCT TCGACGGCCTGCCCGCAGCGCGACAAGGCGATGTCAGCGCCTGCGGCAGCCCGATCGTCTCCGGCGTTTCATCGAGCGTGTTCATCAATGGCCAGCCCGC CGCCACACTGGGCAGCCTGGGTGCGCACGGCAACGTCATCATCGGAGGCTCGGGCACCGTCATCATCGGCGATACGTTCACCCCCGCGCCGGTTACTCCC GTGGCGCCGTTCCCTGGCAGCACCGCGCCGTACTCCGGGCGCTTTCAGCTGATCGACCAGGAAACGGGCAAGCCCGTCGCCGGCCGCAGGGTCAAGCTCT GGTCCAGCGCCGGCTGGTCCGCCATCGACACCACGGATGCCGAAGGCATGACGTCATGGGTCAGGCACGAGACGGCGGAAAACATCTACATCGACCTGCT GCCCGGGGGCGAAGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGATCAGCCCAGCCTCGCCCAGGGCGGCATGAGCCCGGAAGGCCAGAACAATCCGCTGAACATCCTGGAACCCAAACTCGCCCCGCAGGACAAGAAGGT ATTGTGCTCGGCGATCTGCTATTGCAGCAGCACGCCCAACGTCAGCCAGGATGGCAAGAACCTCAAGCAGACCTGCGTGGCCCAGCGCCTGGGCGAGCTG GACGAAATCCTGCAAGGCCGTAGCCCGTACAAGCCCGAGGTCAGTTACGACATGACCAAGAACCCGCCGCAGCCGATTCTCGACAGCCAGACCGGCAACA GTCCGCATGGCTGGATTCCCGGCTGGATCAGTAAATACTGGGACGAAGACCCGGAGCATCCGCCGTTCAAGCGGGGGAAGGGGATGATTCGTCGGCCTGA CGTGGTGATCGTCAATGATCCGAAAAAGCCACCAACCCAGGACAATATCAAGCAGGTGGTCGAGATGAAGTTTCCGCCTGATCCGCGCAAACAAGAACAG
Amino Acid Sequence
>Rhs element Vgr protein
MSGKPAARVTDPTACPLPGHGTNPIVSGSPDVIFDGLPAARQGDVSACGSPIVSGVSSSVFINGQPAATLGSLGAHGNVIIGGSGTVIIGDTFTPAPVTP VAPFPGSTAPYSGRFQLIDQETGKPVAGRRVKLWSSAGWSAIDTTDAEGMTSWVRHETAENIYIDLLPGGEA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site