Pseudomonas sp. AAC, FG99_RS22940

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. AAC Scaffold6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCGCCGACCAGCAGGGCATCCAGCGCGACGTCCGCGCCCAACTGGTGCTGCCGGGCGTGCGCGTCCTCACCTATGGCGAGCAGATCGCCGTGGCCGGCG ACGGCCAGGCGCGCAACCCCGGCGACGGCCAGGACAAGGAACGCAAGGTGGCGCGCACCACGGTGCTGGCGGTGCCGGCGAACGCCACCGCGCGGCTGAT GCTGGCCAGCCAGGCCGGCTCGTTGCGCCTGGCGGTGCGCAGCAAGGACGAGAAGCTCTACGAGAAAGAGCAGCAGGGCAGCTACCAGCACACCGCCCTG AGCGCCGCGAACACCGAGTCCATCACCCTGGAGCAACTGCTCGGCCGCCGCCAGCCGGTGGCCGCGGCGGCTCCGCGCAACCCGGCCCGGCCGCGGGCCG CTGCGGGCGTGACGGTCTACCGTGGCGGCACGGTCGCGCACGAGGCGCCTTGAATCAGCCCCTGAAGCAGGGAGAGGGAGTAGTTAGGATGGCTTGCAAT
DNA Sequence for Gene
>FG99_RS22940
ATGGGATACCGGCGTCCGGCTGGTGGGGTGGGCGTTTGCCTGGCGGGCGTCATGGCGTGGGCGCTGCTGGGTTCGGCGCAGGCCGCGCCCAAGGCCTGCG AAGGGCTGGCGCAGTTGCCGCAGAAGCTGGTGCTGGCGCTGCAGCAGGGCGCCCAGCAGGACCAGCAGCTGCCGCTGCCGATCAAGCGCCTGGCCATTGG CGACCCGCAGATCGCCGACGTGCAGCTGCTGGACAAGCGCAACTTCCTGGTCACCGGCAAGGCCCAGGGCGAGACCAGCCTGCTGGTCTGGACCGGCTGC CCGGGCGACCCGCTGCGGGCCCAGGTGCAGGTGGCCGGGCGTTCGATCCGCGACGTGGGCGCGACCAGCGACGCCGTCGCCGCCGCCAACCTGGCCAGCC AGGTGCAGACCGACATCCGCTTCGTCGAGGTCAGCCGCAGCAAGCTCAAGCAGGCCAGTACCTCGCTGGTGCGGCGCGGCTCCAACCTGTTCATGCTCGG CGCGCCGGGCAGCCTGAGCGGCATCAGCGTGGGCTCCGACGGCGGCGTGACGGGCAACTTCGGCACCAGCGACAGCGGCTTCAATGTCATCTGGGGCGGC GGCAGCAGCAAGGTGCTGGGCTTCCTCAACATGCTCGAAGGCAGCGGCTTCGCCTACACCCTGGCGCGCCCCAGCCTGGTGGCCACCAGCGGGCAGAGCG CGTCCTTCCTGGCCGGCGGCGAGTTCCCCATCCCGGTGCCCAACGGCGATAACAACAACATCACCATCGAGTACAAGGAATACGGCGTGCGCCTGACCCT GACGCCGACGGTGATGTCCACCGGGCGCATCGCCCTGAAGGTGGCGCCGGAGGTCAGCGAGCTGGACTTCTCCGCCGGCATCCAGACCAACGGCATCGCG GTGCCGGCGCTCAACGTGCGGCGCACCGACACCAGCGTGATCCTCGCCGACGGCGAGAGCTTCGTGATCAGCGGCCTGATCAGCAGCAACACGGTGAGCA ACGTCGACAAGTTCCCCGGCCTGGGCAACCTGCCGGTGCTGGGCGCGTTCTTCCGTTCCTCGCAGCTGGACAAGGACGACCGCGAACTGCTGATGGTGGT CACCCCGCACCTGGTCCAGCCGCTGGCGGCCAATGCCGCGCTGCCCAAGCTGCCCGGCGAGGGCCTGCGCAACTACGACCCCGGCTTCGGCGAGTTCTAC TTCCTGGAGAACGGCCAGTACGACGGCCGCGCTTCGGCCAGCGGGATGTCCCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGCCGGCGATCCGTTGGGCCGCAGCGGCAGCCGCGTGCCCGCCGCGCAAAGCCGCAACGCCGCCCAGACCTTCGTCGCGCTGACCCAGCACGCCGGCGA GCTGGAGTGGCTGCAGAGCAGCCTGGCCAGCGCCGGCCAGGTGGTCGCCGCCACCAGCGGCACCCTGGAGGAGCTGCTGGCGCTGCTGGAAGTGACCGGC GCCGGCGTGCTCTTCATCAGCCTGAACAAGGCCAACCTGATGGTCCACGGCGCCCTGATCGAGGGCCTGGTGTCGGCGCGGCCGATGCTGGCGGTGGTTG CCGTGGGCGATGGCCTGGACAACCAACTGGTGCTGGCGGCCATGCGCGCCGGCGCCCGCGACTTCGTCACCTACGGCGCCCGCGCCAGCGAACTGGGCGG GCTGGTCCGGCGCCTGGGCGGACGCCTGCCCAGCGTGCCGGTGAGCGCCGTGCAGCAGGGCGAGCTGTTCGCCCTGGCCAGCGCCCGGCCGGACGCCGAC
Amino Acid Sequence
>secretin
MGYRRPAGGVGVCLAGVMAWALLGSAQAAPKACEGLAQLPQKLVLALQQGAQQDQQLPLPIKRLAIGDPQIADVQLLDKRNFLVTGKAQGETSLLVWTGC PGDPLRAQVQVAGRSIRDVGATSDAVAAANLASQVQTDIRFVEVSRSKLKQASTSLVRRGSNLFMLGAPGSLSGISVGSDGGVTGNFGTSDSGFNVIWGG GSSKVLGFLNMLEGSGFAYTLARPSLVATSGQSASFLAGGEFPIPVPNGDNNNITIEYKEYGVRLTLTPTVMSTGRIALKVAPEVSELDFSAGIQTNGIA VPALNVRRTDTSVILADGESFVISGLISSNTVSNVDKFPGLGNLPVLGAFFRSSQLDKDDRELLMVVTPHLVQPLAANAALPKLPGEGLRNYDPGFGEFY FLENGQYDGRASASGMSQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site