Pseudomonas sp. AAC, FG99_RS22010

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. AAC Scaffold6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCACTGGGCTACTACTGGAACGTGCGCCTGGACTTCAACGAGCGCCAGGTCGCGCCGAGCAACGACGCCATCGATTTCTACGCGGCCAATGCCCACAGC CTGCAGTACCGCGAGGACGGCAGCCTGGCCTACGAGATGACCGCCGATCGCCTGGAGCACATGAAAGCCACCGACGTCACCAACGTCACCACGCCGGACC TGTTCTTCTTCCGCGAGGGCGAGCCGCAGCCGTGGCACGTGCAGAGCGTGCGCGCCGAGGTGGGTCCGGAAGGCAAGCAGGTCGAACTGATCGACAACGT CCGGGTCCAGCGCACCGACGCGCAGAACCGCACCCTGCTGCTCACCACCACGCGCATGACGGTGTTCCCGGACAAGGATTATGCCGAGACCAGTCAACCC GTTAAGATCACCGAGCCCCAAGGGGTGACCACGGCGGTAGGCATGAAAGCGTATCTGAAAGACAGCCGGATGACCCTGCTGTCCAACGTAAGAGGTCAGC
DNA Sequence for Gene
>FG99_RS22010
ATGAGGTTCGTTAAAACCTTCCCCCTTTTCCTCGGCCTCGTCGCCGCCCTGGGCAGCAGCGCTGGCTGGGCGCTGCCGACGGATCGCGAGCAGCCGATCC GCGTGCAGGCCGACAGCGCCGAACTGGACGACAAGCAGGGCGTCGCCGTGTACCGCGGCGACGTGGTGGTGACCCAGGGCAGCATGAAGCTGACCGGCAA CACCGTCACCCTCAAGCAGAACAAGGACGGCGAGATCGAGGTGGTCACCTCGGTCGGCAAGCCCGCCTATTTCGAGCAGAAGCCGGCGCCGGACAAGGAA ATCACCAAGGCCTACGGCCTGACCATCCAGTACTTCGTCACCCAGAACCGGGTGATCCTGATCGACCAGGCCAAGGTGATCCAGGAAGGCAACACCTTCG AAGGCGAGAAGGTCGTCTACGACACCGAACGGCAGATCGTCAACGCCGGCCGCGCCACCGGTACCCAGGTGACCACCCCGCGCCCGCGCATCGACATGGT CATCCAGCCCAAGAAGAAGCAGGATCAAGCCCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGCCACGCTCACCGCACAGCACCTCGCCAAGAGCTACAAGGGTCGCCAGGTCGTCCGCGATGTCAGCATGAGCATCGACAGCGGGCAGATCGTCGGCCT GCTCGGCCCCAACGGCGCCGGCAAGACCACCTGCTTCTACATGATCGTCGGCCTGGTCCGCGCCGACCAGGGCGTGGTCCGCATCGACGAGCAGGACGTC ACCAACCTGCCCATGCACGGCCGCGCCCGCGCCGGCATCGGCTACCTGCCGCAGGAAGCCTCGATCTTCCGCAAGCTGTCGGTGGCGGACAACATCGGCG CCATCCTCGAGACCCGCGCCGACCTCGACCGCAACGGCCGCAAGGAGGCCCTGGAAGGCCTGCTGGAGGAGTTCCACATCCACCATATCCGCGACAACCT CGGCATGAGCCTGTCCGGCGGCGAGCGCCGCCGCGTGGAGATCGCCCGCGCCCTGGCCAGCTCGCCGAAGTTCATCCTCCTCGACGAACCCTTCGCCGGC
Amino Acid Sequence
>LPS transport periplasmic protein LptA
MRFVKTFPLFLGLVAALGSSAGWALPTDREQPIRVQADSAELDDKQGVAVYRGDVVVTQGSMKLTGNTVTLKQNKDGEIEVVTSVGKPAYFEQKPAPDKE ITKAYGLTIQYFVTQNRVILIDQAKVIQEGNTFEGEKVVYDTERQIVNAGRATGTQVTTPRPRIDMVIQPKKKQDQAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site