Pseudomonas sp. AAC, FG99_RS21625

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. AAC Scaffold6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACTCGGCGCGCATCGGTAGTTCGCGAGCCATCACCCAGCTGATCCTGCACCTGGTGGAAGGCACGCCGATCCGCCTGGTCGACGGCGGCGCGCAGAAGC GCTGCTTCACCGACGTGGACGACGGCATCGAGGCCCTGGCGCGCATCGTCGACAACGACGGCGGGCGCTGCGACGGGCAGATCGTCAACATCGGCAACCC GGACAACGAGGCGAGCATCCGCGAGCTGGGCGAGGAACTGCTGCGCCAGTTCGAGGCCCACCCGCTGCGCGCGCACTTCCCGCCCTTCGCCGGCTTCCGC GAGGTGGAGAGCCGCAGCTTCTACGGCGACGGCTACCAGGACGTGGCGCACCGCAAGCCGAGCATCGACAACGCCCGCCGCCTGCTGGACTGGGAGCCGA AGGTGCACATGCGCGAGACCATCGCCAAGACCCTCGACTTCTTCCTGCGCGAAGCCATCGCCGAGCAGCAGCAGGCCGGCAAGCTGAGGGTCGCCAGCTG
DNA Sequence for Gene
>FG99_RS21625
ATGCAGGCCGGGCTGCGCATCGACGTCGACACCTACCGCGGCACCCGCGACGGCGTGCCGCGGCTGCTGGAGCTGCTCGACGAGGCCGGGGTGAAGGCGA CCTTCTTCTTCAGCGTCGGCCCGGACAACATGGGCCGCCACCTGTGGCGCCTGGCGCGGCCGCGCTTCCTGTGGAAGATGCTGCGCTCCAAAGCCGCCAG CCTGTATGGCTGGGACATCCTCCTGGCCGGCACCGCCTGGCCCGGCCGGCCCATCGGCCGCGACCTCGGCCCGCTGATGCGGCGCACCCTGGCCGCCGGC CACGAGGTCGGCCTACACGCCTGGGACCACCACGGCTGGCAGGCCAACGCCGGCCACTGGAGCGCCGAGCAGCTGCACCGGCAGATCGCCCTGGGCGTGG ACAGCCTCAGCGACATCCTCGGCCAGCGCGTGGACTGCTCGGCGGTGGCCGGCTGGCGCGCCGACGAGCGCACCGTGCAGGCGAAAGAGGCCTTCGGCTT CCGCTACAACAGCGACTGCCGCGGCGCCTCGCCGTTCCGCCCGCGCCTGGCCGACGGCCGCCCAGGCACCCCGCAGGTGCCGGTGGACCTGCCGACCTTC GACGAGGTGGTGGGCCCGGACCTTTCCGCCGACGCCTTCAACGACTTCATCATGGCCCGCTTCCGCCCGCGGGCGCTGAACGTCTACACCGTGCACGCCG AGGTGGAAGGCATCGTCATGGCCGACGTCTTCCGCGCGCTGCTGGGCCATGCCCGCGAGGGCGGCATCCGCTTCCGCCCCCTCGGCCAGTTGCTGCCGGC CGACCCGGCGACGCTGCCGCTGGGCGAACTGCGCCGCGGCAGCCTGGCGGGCCGCGAAGGCTGGCTGGGCGTACAGCGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCGGCGCTATAGCTTGCTGGCCGGGGCCGTGCTGGTCCTGTTCTTCCTCGTGCCGCTGGGCCTGCACGGCCTGTGGATACCCGACGAGACGCGCTACGC GCAGGTCGCCCAGGAAATGCTGCAGCGCGGCGACTGGGTGACGCCGCACTTCCTCGGCCTGCGCTACTTCGAGAAGCCCATCGCCGGCTACTGGCTGGTC GCCCTCGGCCAGGCGGCGTTCGGCGAGAACCTGTTCGGCGTGCGCTTCGCCTCGGTGCTGGTCAGCGCCTGCAGCACCCTGCTGGTCTGGCTGCTGGGCC GGCGGCTGTGGCCGCAGCCGGGCCGGGCGTGGATGGCCGCGCTGCTCTACGCCAGCTTCGCGTTGATCGCCGGGCAGGCCGGCTACGCCAACCTCGACCC GCAATTCACCCTGTGGGTAAACCTGAGCCTGTTCGCCCTGTGGTTCGCCTTCGAGGCCACCTCGCACCGCGCCCGCCTCGGCGCCTGGATCACGCTGGGC
Amino Acid Sequence
>4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase
MQAGLRIDVDTYRGTRDGVPRLLELLDEAGVKATFFFSVGPDNMGRHLWRLARPRFLWKMLRSKAASLYGWDILLAGTAWPGRPIGRDLGPLMRRTLAAG HEVGLHAWDHHGWQANAGHWSAEQLHRQIALGVDSLSDILGQRVDCSAVAGWRADERTVQAKEAFGFRYNSDCRGASPFRPRLADGRPGTPQVPVDLPTF DEVVGPDLSADAFNDFIMARFRPRALNVYTVHAEVEGIVMADVFRALLGHAREGGIRFRPLGQLLPADPATLPLGELRRGSLAGREGWLGVQR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site