Pseudomonas sp. AAC, FG99_RS20885
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. AAC Scaffold5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGCCGCTCCCTTCCTGGCCCATGCCGATCTGAAATCCATGGACGACAGCGCGCTCGCCGGCGTGACCGGCCAGGACGGCATCAGCATCGCCGGTGACT TCAAGGCGAGCATCGGGGCGGTGGTCTACACCGACAAGATCGACGACACCAAGTCCGGTTCCCTGCGCCTGGAGAACATCACCCTGACCGGCCCGGGCGG CACCGCCCTGAAGATCGACGATGCCAACCCGCTGACCGTCGACGTGGTCACCACCAAGATCGGCACCGCCGACACCCAGCAACTGGCCCTGGGCCTGCCG GGCATGACCGGCGACGTCTCGGTGGGCGCCATCAAGGTGGGCGACACCAGCGCCGCCAGCATCGGTTCGCTGACCGTGTCCAACCTGAACATGGCCGGTT CCCAGGTTCGCATCTGGGGCCACTGATCCATCGGTCGTGTGACGCGTATCCCCTTGCCGGCCCGTGCCGGCAAGGGTTCTTCCAGGAGAGAGGAGAGGGG
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| DNA Sequence for Gene |
>FG99_RS20885
ATGTTCGAGATACTGCTGGGAAGCCTGCTCGGCCTGTTCGGTTTCACCCAGACGGTGGATACCCAACCGCAACCCCGGGGCACGGTGAACATCACCCAGC AGCTCACGCCCAACGGCCCCTTCCGCGAGGCCGTGCAACTCGAACCCATGAGCCAGGTGCAGTTCCGCAACGTCATCCGCCAGGCCTACGACTACAGCTG CGGCTCGGCGGCGCTGACCACCCTGCTGGACTACTACCTGGGCCGCGACCTGCAGGAACGCCAGGTGATGGAAGGCCTGCTGAAGTACGGCGAGGCCGAC AAGATCGTCCAGCGCCGCGGCTTCTCGCTGCTGGACATGAAGCGCTACGCGGCCGCGCTGGGCTACAGGAGCGGCGGCTTCCGCGCCGAATTCTCCGACC TGGATTCGCTGGAGCACCCGGCGCTGGTGCCCATCCACTACGGTGGCTTCAAGCATTTCGTGGTGGTGCGCGACGTCTACAACGACCACGTCTTCGTTGC CGATCCTGCCCTGGGCAACATCAGTTTCACCCGCAGCCGCTTCGAGGCGATCTGGGACCAGAACGTGCTCTTCGTCATCTACCCAAGCGGCCAGGAGCCG AAGAACGCCCTGGCCCTGAAGGAGCAGGACCTGCGCCTGGTGGACGACCGCACCGTGAGCCTGCTGGCCTTCCGCGAGTTCCCGGAAATGAGCAAGTTCA CCAGCAACCGGATGATCGAGGCCGCATCCAAAGGCGACGTGCAGTTCATACGCAGCAAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGACGTTTCATCCTTCCATAAGAACAAGACCAGGGGATTGCATCATGAGATTCAGGGGGTATGCGTGCGCCGCCATACTGGCCTTGCTGGCATCGGGCC CGGCGCCGGCCGAGGAAGGCTCGGTCGATCAGGCGCGTGACGCGCTGGCCAAGAAGGCCGACGACGCCGACAGCGCCAAGGCTCTGGAAGAGGTGTTCCA GGCGGCGGAGAAGAGTTACACCCTGCTGAAGAAGGGCGAGCGGACCCTCACCTACGGCCTGGACTACTCGATGATGCGCGACACCCGCATCCAGCAGGTG CGCACCGGCGACAGCGTCTACAGCGTGCTGGCGACCAGCGAGGCGCAGCACACCTTCACCAACTCCTTCACCTTCGACTACGGCATCTGGGACAACCTGA CCTTCAGCCTGCGCCTGCCCTTCGTGGCCAAGTACGACACCGAGAGCGACGTCCACGCCTACAGCCTCGGCGACATTTCCGCGACCCTGCGCTGGCAGCC
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| Amino Acid Sequence |
>peptidase
MFEILLGSLLGLFGFTQTVDTQPQPRGTVNITQQLTPNGPFREAVQLEPMSQVQFRNVIRQAYDYSCGSAALTTLLDYYLGRDLQERQVMEGLLKYGEAD KIVQRRGFSLLDMKRYAAALGYRSGGFRAEFSDLDSLEHPALVPIHYGGFKHFVVVRDVYNDHVFVADPALGNISFTRSRFEAIWDQNVLFVIYPSGQEP KNALALKEQDLRLVDDRTVSLLAFREFPEMSKFTSNRMIEAASKGDVQFIRSK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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