Pseudomonas sp. AAC, FG99_RS20200
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. AAC Scaffold5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCGCCCCGCGCCAACGCCTGGAGTGTCTGCCCAACGCCTGCTACGCCCTCGCCGAGGACTTGCAGGCGCGCGGCCTGCAGGAACACCTGCCGGCCAAC CTGAAGGCCGTGGACTACCCCGCCTTCGTCGAACTCTGCACCCGCTACGACAAGGTCAACGCCTGGCTATGACTACCCTCATGGTGGAAGGGCGCGCCAT CGCCCTGGACAAGGACGGCTACCTGCAATACCTGGACGACTGGTCGGTAGCCGCCGCCGAAGCCCTGGCCCGCCAGGAAGGCCTGCACCTCACGCCGGAA CACTGGGAAATCCTCCACCTGCTGCGCGAGTTCTATGCGCAGTTCCAGCTGTCGCCGGCCAACCGCCCGCTGATCAAGTACGTGGCCCAGCGCCTGGGCG CGGAAAAGGGTAGCAGCCTGCACCTCAACCTCCTGTTCAAAGGCACCCCGGCCAAGCTTGCCGCCAAGCTCGCCGGCCTGCCGAAGCCGACCAATTGCCT
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| DNA Sequence for Gene |
>FG99_RS20200
ATGACCGCCACGCCTCTCGTCCTGCAGACACCCGCCGAACACCCTTTCGCGCAGTTCGTGCGCATCCTCGGTAAGGGCAAGCGCGGCGCGCGCAGCCTGA CCCGCGAGGAAGCCCGCGAGGCCCTGGGCATGATCCTCGACGGCCAGGTCGAAGAAGCGCAGCTGGGTGCCTTCCTGATGCTGCTGCGGCACAAGGAGGA AAGCGCCGATGAGCTGGCCGGCTTCACCGAGGCCGTGCGCGCGCGCCTGGACGCGCCGCGGATCGCCGTCGACCTCGACTGGCCCAGCTATGCCGGCAAG AAGCGCCACCTGCCCTGGTACCTGCTCGCCGCCAAGTGCCTGGCCGGCAGCGGCACGCGCATCCTCCTGCACGGCGGCGGCGCGCACACCGCCGGGCGCC TGTACACCGAGCAGTTGCTGCAGACGCTGGACATTCCGCTGTGCCGCGACTGGAACGCCGTGGGCGAAGCGCTCGACCGGGGCGGCCTGGCCTTCGCCCC GCTGGTGGACTGGATGCCGGCGCTGCAGCGGATGATCGACCTGCGCAACACCCTCGGCCTGCGCTCGCCCATTCATTCCCTGGTGCGCCTGCTCAACCCG CTGGGCGCGCACTGCATCCTGCAGAGCATCTTCCACCCCGGCTACCAGGAAACCCACCGCGAAGGCAGCCGCCTGCTCGGCGACCGCGCCATCGTGATCA AGGGCGAAGGCGGCGAGATCGAGATCAACCCGGACAGCCCGGCGCACCTCTATGGCACCGAGTCGGGCGCCAGCTGGGACGAGGAATGGCCGGCCCTCTC GGCGCTGCGCCACGTCAAGCCGGAGCGCCTGGAGCCGCAGGTACTGGCCGAGTTCTGGCGCGGCGAGCGGGAAGACGCCTACGGCGAACTGGCAGTGATC GCCACCATCGCCCTGGGCCTGCGCGGGCTGGGCCGCGACCGCGAGGCGGCCTTCGCCGAGGCCCGGCAACGCTGGGCCGCTCGGGACAGATCGATCGGGT AG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATAGCTTCTACCCTGTTTTTGCAGCGATCCATCGATAGCAAGGGCGTAGACTGATCCCCATACCCTTTCCTGAGGAGCCAGTCATGGGACAGCTCATCGA TGGCCGCTGGCAAGACCAGTGGTACGACACCAGCAAGGATGGCCGTTTCCAGCGCGAGAACGCGCAACGCCGCAACTGGGTCACCGCCGACGGCCAGCCC GGCCCCAGCGGCGAAGGCGGCTTCCGCGCCGAGGCCGGGCGCTACCACCTGTACGTCTCCCTCGCCTGCCCCTGGGCACACCGCACGCTGATCTACCGCC AGCTCAAGGGCCTGGCCGGGCTGATCGACGTTTCGGTGGTCAGTTGGCTGATGCGGGAGAACGGCTGGACCTTCGACCGCAGCCTGGGCTCCACCGGCGA TGCCCTGGATGGGTTGCAGTTCCTGCACCAGCGCTACACCCGCGACGATCCGCACTACACCGGCCGCGTCACCGTGCCGGTGCTGTGGGACAAGCAGCGC
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| Amino Acid Sequence |
>hypothetical protein
MTATPLVLQTPAEHPFAQFVRILGKGKRGARSLTREEAREALGMILDGQVEEAQLGAFLMLLRHKEESADELAGFTEAVRARLDAPRIAVDLDWPSYAGK KRHLPWYLLAAKCLAGSGTRILLHGGGAHTAGRLYTEQLLQTLDIPLCRDWNAVGEALDRGGLAFAPLVDWMPALQRMIDLRNTLGLRSPIHSLVRLLNP LGAHCILQSIFHPGYQETHREGSRLLGDRAIVIKGEGGEIEINPDSPAHLYGTESGASWDEEWPALSALRHVKPERLEPQVLAEFWRGEREDAYGELAVI ATIALGLRGLGRDREAAFAEARQRWAARDRSIG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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