Strain | Pseudomonas sp. AAC Scaffold5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACCGCCAGCTTGTGGTTGGCGTAGGGCTCGCGGTACGGGTTGGTGTCGCGCCACTCCTTGCCCAGGGGCTCCAGGCCCTTGGTATCCACCGCTTGCGGGG TCACGTTGCCATGGGCCAGGGCCAGGGCCGAGACGCTGAGGCCGGCCAGCACCAGCAGGCCGCGCAAGGAGTTCTTCTTGTTCATCACTTCATTCCTCTG GGGGTAGGACAAGGCACGGGCGCCACCGGAGGCGCTCCTCGACCATGTTAGGAAGCCCCGCCCCCGCCCCGAATGCTGCTTTGGATGCCCCCGCCTACTC CCTTCGTACTAGGGCGCAGGGCTGCCGCTCCAGGGGCCTTCGGCAGCAAGTCCAAGTCATGCCCCGACCGGGAACTTGTCCCGGCCGATGCGGGAGCTTT TCCGTTTCCGCTGGGGCGGCTGGCTCCCACCATGGAACCGCCGCGGCCCGAGCAGCGGCCCGCCGTTTCTCGACCCAACACCAAAAACGGGAACCCGAAG
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DNA Sequence for Gene |
>FG99_RS19500
ATGACAACAAGAACCTCCCCCGCCTCTTCACCAACGCCTGCCGGCCCCCTGCGCCTCGCCCTGCACAGCCTGACCCTCGCCATCGCCCTGGGCGCCGGCG GCGCGGCGCTGGCCAAGGACGTCAGCTGGGACGACATCGCCAACGACCACAAGACCACCAGCAACGTGCTGCAGTACGGCATGGGCACCAACGCCCAGCG CTGGAGCCCGCTCAAGCAGGTCAACGCCGATAACGTGTTCAAGCTGACCCCGGCCTGGTCCTACTCCTTCGGCGACGAGAAGCAGCGCGGCCAGGAATCC CAGGCCATCGTCAGCGACGGGGTGATCTACGTCACCGCCTCCTACTCGCGGCTGTTCGCCCTCGACGCCAAGACCGGCAAGCGCCTGTGGACCTACAACC ACCGCCTGCCCGACGACATCCGCCCGTGCTGCGACGTGGTCAACCGCGGCGCCGCCATCTACGGCGACAAGATCTTCTTCGGCACCCTCGACGCCTCGGT CGTGGCGCTGAACAAGAACACCGGCAAGGTGGTATGGAAGAAGAAGTTCGGCGAACACGGCGCCGGCTACACCATGACCGGCGCGCCGACCATCGTGAAG GACGGCAAGACCGGCAAGGTGCTGCTGATCCACGGCAGCTCGGGCGACGAGTTCGGCGTGGTCGGCCGCCTGTTCGCCCGCGACCCGGACACCGGCGAGG AAATCTGGATGCGGCCCTTCGTCGAAGGCCACATGGGCCGCCTCAACGGCAAGGACAGCAGCGTCACCGGCAACGTCAAGGCGCCGTCCTGGCCGGACGA CGCCAACTCGCCCACCGGCAAGGTCGAATCCTGGAACCACGGCGGCGGCGCGCCCTGGCAGAGCGCCAGCTTCGATGCCGAGACCAACACCATCATCGTC GGCGCCGGCAACCCCGGCCCGTGGAACACCTGGGCGCGCACCGCCAAGGGCGGCAACCCGCACGACTACGACAGCCTCTATACGTCCGGGCAAGTGGGCG TGGACCCGAGCACCGGCGAGGTGAAGTGGTTCTACCAGCACACCCCGAACGACGCCTGGGACTTCTCCGGCAACAACGAACTGGTGCTGTTCGACTACAA GGCCAAGGACGGCAAGATAGTCAAGGCCACCGCTCACGCCGACCGCAACGGCTTCTTCTACGTGGTCGACCGCAGCAACGGCAAGCTGCAGAACGCCTTC CCCTTCGTCGACAACATAACCTGGGCCAGCCACATCGACCTGAAGACCGGCCGCCCGGTGGAACGCGAAGGCCAGCGCCCGCCGCTGCCGGAACCGGGGC AGAAGCACGGCAAGGCGGTGGAAGTCTCGCCGCCCTTCCTCGGCGGCAAGAACTGGAACCCCATGGCCTACAGCCAGGACACCGGCCTGTTCTACGTGCC GGCCAACCACTGGAAGGAGGACTACTGGACCGAGGAAGTCAGCTACACCAAGGGCAGCGCCTACCTGGGCATGGGCTTCCGCATCAAGCGCATGTACGAC GACCACGTCGGCAGCCTGCGCGCCATGGACCCCACCAGCGGCAAGGTGGTGTGGGAACACAAGGAGCACCTGCCGCTGTGGGCCGGCGTGCTGGCCACCG CCGGCAACCTGGTGTTCACCGGCACCGGCGACGGCTTCCTCAAGGCCTTCGACGCGAAGAACGGCAAGGAACTGTGGAAGTTCCAGACCGGCAGCGGCAT CGTCTCCCCGCCCATCACCTGGGAACAGGACGGCGAGCAGTACATCGGCGTGACCGTCGGCTACGGCGGCGCCGTGCCGCTGTGGGGCGGCGACATGGCC GACCTGACGCGCCCGGTGGCCCAGGGCGGGTCCTTCTGGGTGTTCAAGCTGCCCAGCTGGGACAACAAGACCGCCAGCCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCCACCGACCGCGCCCCCTGGGGCGCGGTTTTCCATGCCCCGGGAGACCGTCATGAAAACCACCACCCTGCTCGCCGCCCTGCTGCTGGCCGGCCTGGC CCACGCCAGCGACGAATCCGCCGACACCGACGACGACGCCACCGTCATCGCCCACTGCCGCATCGAGCCCGGCAGCCAATGCCCCGGCGCCGACCTGCGC GGCGCCGATCTGAAAGGCCAGGACCTCAGCCGCATGAACCTCGCCGGCGCGGACCTTTCAGGCGCCGACCTGCGCCACGCCACCCTCGACCTGGCCAACC TGGAAAAAGCCAACCTGCGCGGCGCCAACCTCACCCGCGCCAGCCTGCAACAAGCCAACCTGCGCGCCGCCGACCTCTCCGGCGCCAGCCTGGTGGCCAT CCAGGCCTGGGGCCTGTTCGCCCAGGGCGCCCAATGGCAAGGCGCCGACCTGACCGCCGCCTACCTCGAATTCGCCCGCCTGAGCGGCGGCAAACTGCAC
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Amino Acid Sequence |
>quinonprotein alcohol dehydrogenase
MTTRTSPASSPTPAGPLRLALHSLTLAIALGAGGAALAKDVSWDDIANDHKTTSNVLQYGMGTNAQRWSPLKQVNADNVFKLTPAWSYSFGDEKQRGQES QAIVSDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKIFFGTLDASVVALNKNTGKVVWKKKFGEHGAGYTMTGAPTIVK DGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSSVTGNVKAPSWPDDANSPTGKVESWNHGGGAPWQSASFDAETNTIIV GAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSTGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAF PFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYD DHVGSLRAMDPTSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGFLKAFDAKNGKELWKFQTGSGIVSPPITWEQDGEQYIGVTVGYGGAVPLWGGDMA DLTRPVAQGGSFWVFKLPSWDNKTASR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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