Strain | Pseudomonas sp. AAC Scaffold5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGAGCGAAGCGATACCCATCACCAGCACCGCATGGGTTTCGCAAGCTCAACCCATCCTACGAAAAGCACCTTGGCACGGAGTCGTAGGGCGGATAACCAC GAACGGTTATGCCTGAAATAGCCATGCCATTCCCCTGTAGGAGCGCGCCCTGCGCGCGAATCGCGGGCAGGGCCCGCTACAGGTCGACGCCAAACCTCCC CACCCACGCCGAACGGCCCCCTCTCCCTCCGGGAGAGGGCTGGGGTGAGGGGCTCTTGACCCCCACATCGCCAGCCACATACCACGCTCTTCGCTGTATC CCAATGTATCCAACCCGCCCCTCCGCAAGGCACGCATACAAACCCAACCCCCCTCCGATACGCCACCGATACATGGCGCGGGCCAAATGGCCACACCCGG ACGCGACACCCGGCGGGCTTCGAAAGCCAGCCCCTCGCGCATCCCGGTCCGACCAAGCCCCAGACCCGCGCCCCAAGCGCCCAGCATCGGAGAACCACCC
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DNA Sequence for Gene |
>FG99_RS18045
ATGTCCCGTAACCCGATCCAGACCAAGACCCGCATCGGCCTGCTCGCCATCGCCCTGGTGGGCGGCGCCAACCTGGCCACCTCGGCCTTCGCCGTCGAGG CGCTGCCCCAGGGCTACCAGCTCGCCGCCGCCGACAAGGCCGGGGAGGGCAAGTGTGGCGAAGGCAAGTGCGGCGCCAGCAAGGCCAAGGTCACCCAGGC CGAAGGCAAGTGCGGGGAGGGCAAGTGCGGCGACGCTTCCTTCACGCGCACCGACAGCGACCACGACGGCAAGGTCTCGCGCGACGAGTTCCTGGCCGTG GCCAGGGACCGCGCCGGCGACTTCGACGGGATCGACGCCGACCACGACGGCTTCATCTCCGAAGCCGAGGCCTACCAGCACCTGAAGAACGTCTTCGAAT CCAACGGCAAGCCAATGCCGGCCGGGCTGTTCGCCAGGTTCCAGGGCGACCGCCACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGGACGCGCCACCCAGCCCTCCCTGCCGGGAGGGCACTCCTCCTCCGCGGAGCCTTGCCATGAATGCCCATTCCCTACCGCGCGGTGCCGGCCTCGGC CTGCGTCGCGCGCTGCTGCCCGAGCTGCTGGCGATGCCTACCGCAGCCGTGGACTTCCTCGAATGCGCGCCGGACAACTGGATCGGCGTCGGCGGTGCCT ACGGCGACGGCCTGGCGCAGCTGGCCGAACGCTTCCCGCTGGCCTGCCACGGCCTGTCGCTGTCCCTCGGCGGCCCCGGGCCGCTGGACCTGGAGCTGCT GCGGCGCACCCGGCAATTCCTCGACCGCCACCGCGTCGGCCTGTTCAGCGAACACCTGAGCTATTGCTCCGACGACGGCCAGCTCTACGACCTGCTGCCG CTGCCCTTCACCGACGAGGCGGTGCATCACGTCGCCGCGCGCATCCGCCAGGCTCAGGACGTGCTGGGGCGGCGCATCGCGGTGGAGAACATTTCCTACT
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Amino Acid Sequence |
>hypothetical protein
MSRNPIQTKTRIGLLAIALVGGANLATSAFAVEALPQGYQLAAADKAGEGKCGEGKCGASKAKVTQAEGKCGEGKCGDASFTRTDSDHDGKVSRDEFLAV ARDRAGDFDGIDADHDGFISEAEAYQHLKNVFESNGKPMPAGLFARFQGDRH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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