Pseudomonas sp. AAC, FG99_RS12810
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. AAC Scaffold3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCCAGTGCAGCTTCAGCGGGATCGGCACCTTGGCGTAGCCGTAGCCGGGCAGGTCGACCAGGCGGCGCTCGTCGTCCAGGCGGAAGAAGTTCAGCAAC TGGGTGCGCCCGGGGGTTTTCGAGGTGCGCGCCAGATTGGCATGGGTGAGTGCATTTAGCGCGCTAGACTTACCAGCGTTGGAACGGCCGGCGAAGGCGA CTTCGCGGCCGCTGTCTTCCGGGCACTGCTCGACCTTGGCCGCGCTGATCAGGAAGGTTGCCTGCTGGCAAAGGCTGAGGATGGGGTTCTTGGCAGGGCT CTTGGGGGGCATGGGGGGCTTCCGCGGCGGGGTGCGACTCGGTGTCGCGGGGGCCGGTCTCGTTTTCGAACAGGCAGGCGAAGTATATAATGCCGCGGAT TTTGTGTGCGCTTTATCCCCCAGGGTCGGGCGCCACGGGAACGCGATAATCAACCGGCCGCGCAATAGAACGCGGACGTTCCCTCCCGATGAGGACGATC
|
|
| DNA Sequence for Gene |
>FG99_RS12810
ATGAAGAAACTGCTGTTCGCAGCCGTAGCCGCCGCGATGGCTACCAGCGTGCAGGCCGCCCAGGACCCGGAAGCGGTATTCAACCGGGCATGTGGCGCCT GTCATGCCGGCCAGTTGCCGATGGCCCCGAAGAAGGGCGACGCCGCAGCCTGGAAACCGCGCCTGGACAAAGGCATGGATACGCTGGTGCAGCACGTCAC CAACGGTTTCAACGCCATGCCCCCGCGTGGCCTGTGCACCGACTGCAACACCGAGGACTACAAGGCAATCATCCAGTGGATGTCCAAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCCGGGCTTTTCTCTTTCACCTATTAGCCGTAATGGATTAGCTGATGAACAAAATAATCGTGAGTCTGCTCTTGACCCTGGGACTGACCGCCATGGCCCA CGCCGAAGTCGGCGATGCCAAGGCCGGCCAGGCGAAGGCCGCCGTGTGCGGCGCCTGCCATGGTGCCGATGGCAACAGCATGGCGCCGAACTTCCCGAAA CTGGCGGGCCAGGGCGACAAATACCTGCTCAAGCAGATGCATGACATCAAGGACGGCAAGCGCACCGTTCTGGAGATGACCGGCCTGCTGACCAACCTCA GCGACCAGGACCTGGCCGACATCGCCGCCTACTTCTCCAGCCAGAAGATGAGCGTCGGCGCCGCCGATCCCAAGCTGGTCTCCGCCGGCGAGGCCCTGTA CCGCGGCGGCAAGCTCGCCGAGGGCATGCCCGCCTGCACCGGCTGCCACTCGCCCGACGGCGTGGGCAACGAGCCGGCCGCCTTCCCGCACCTGGGTGGC
|
|
| Amino Acid Sequence |
>cytochrome c
MKKLLFAAVAAAMATSVQAAQDPEAVFNRACGACHAGQLPMAPKKGDAAAWKPRLDKGMDTLVQHVTNGFNAMPPRGLCTDCNTEDYKAIIQWMSK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|