Strain | Pseudomonas sp. AAC Scaffold1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGGCCCGGCCCCGCGACCGGACAGCGCCCGGAGCGCGGTGCCCGGCGGCTCATCAGCGTACAAGGAGTTCCGATGTCCCGACGTCATCTGCTGCCCCTGC TGTTCTGCCTGAGCCTGCCGCTCGCCGCCCACGGCGAGGAGCCCGCCACCGACGACCCCGGCGCCATGCCGGCTCCCACTGCCGCGCCGGCCCCGGCCAG CGACGACCTCGCCCAACTGCAACAGCGCCTGGACGAGAGCGAGAAGCAGCGCACCGACCTCGCCGCCCAGCTGCAAGGGGCGGAAAGCGCCGTGGTGGGC CGCCTGCGCCAGGAAAACCAGCGCCTGAAGCTGCAACTGCGCGAGCTGCAGGCCCAACAACCGCCGCGTCTGCTCAGCGACGAGCAGACCTGGTTCGCGA CCGGCGGCGCCGTCGCCCTCGTCGCCTTCGTCCTCGGCGCCCTGAGCCGCGGCCGTCGCCGCCGGCGGCGTGAATGGATCAACTGAAAGAAGCCCGAGCA
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DNA Sequence for Gene |
>FG99_RS04735
ATGAGTGAGCTGCTGCTGATCGACGACGACCGTGAACTGTGCGAACTGCTGTGCACCTGGCTGACCCAGGAAGGCTTCAGCGTGCGCGCCAGCCACGATG GCGGCGCGGCCCGTAGCGCCCTGGCCAGCCGCACGCCGGACGCCGTGGTGCTGGACGTGATGCTGCCCGACGGCAGCGGCCTGGAGCTGCTCAAGCAGCT GCGCAGCGAGCACCCCGACCTGCCGGTGCTGATGCTCTCCGCCCGCGGCGAGCCGCTGGACCGCATCCTCGGCCTGGAGCTGGGCGCCGACGACTACCTG GCCAAGCCCTGCGATCCGCGCGAGCTGACCGCGCGCCTGCGCGCCGTGCTGCGCCGCAGCCACCCGGCGCAGCCCAGCGCCCAGGTCGACCTCGGCGACC TGAGCCTGAACCTGGCCCGCGGCGTGGCCAGCGTCGCCAGCCAGGAGGTCAGCCTGACGCTGTCCGAGAGCCGCATCCTCGAAGCGCTGCTGCGCCAGCC CGGCGAGCCGCTGGACAAGCAGGCCCTGGCGCAGATCGCCCTGGGCCGCAAGCTGACGCTCTACGACCGCAGCCTGGACATGCACGTCAGCAACCTGCGC AAGAAGCTCGGCGCGCACCCGGACGGGCGTCCGCGCATCCTCGCCCTGCGCGGGCGCGGCTACTTCTACGCGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGAACGGCCGGGAACCCCGCCCCAGAGCGGTAGACGCAATCTTTACCGAAGCTTTACCCGGCCCTGACCGCCCTTGACCTTGCCATCCCTAGACTGGGC ACATCCGGTTCAGAAACCGGTCCACGAAAGGAGAAGATTCATGCGCAAGACCCTCACCGCCCTGATGTTCGCCGCCGCCCTGCCGACCCTGGCCATGGCT GCCACGCCGGTCCCAACCGATACCCCGCCGCCGCCCGCTCACATGATGGGCGGCCACATGAAGGACGGCCACGGCCCGCGCGGCGGCTGGAACGGCCCCT TCAAGGCCCTGAACCTGAGCCCCGAGCAGCGCCAGCAGGTCGGCAAGCTGATGGGCGACTCGATGAAGAGCCGCCACGACATCACCGACAAATACCTGAG CAAGCTCTCGGCCGCCGACCAGAAGGCCATGCAGGACGAGCTCAAGGCCAGCCACGACAAGACGCAGAAGGACATCCGCGCGCTCCTGACGCCCGAACAG
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Amino Acid Sequence |
>chemotaxis protein CheY
MSELLLIDDDRELCELLCTWLTQEGFSVRASHDGGAARSALASRTPDAVVLDVMLPDGSGLELLKQLRSEHPDLPVLMLSARGEPLDRILGLELGADDYL AKPCDPRELTARLRAVLRRSHPAQPSAQVDLGDLSLNLARGVASVASQEVSLTLSESRILEALLRQPGEPLDKQALAQIALGRKLTLYDRSLDMHVSNLR KKLGAHPDGRPRILALRGRGYFYAP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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