Pseudomonas sp. AAC, FG99_RS04660
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. AAC Scaffold1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGCCTGCATGCCGGTGATCATGCTCACCGCCAGTTCCGACGAAACCGACCGGGTGATCGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCCT TCAGCCCGCGCGAGCTGCTGGCGCGGATCAAGGCCCTGCTGCGCCGCGCGCAGTTCACCCAGGTGCGCGGCGGCGAGGTGCTGGCCTTCGACGACTGGCG CCTGGACACGGTCAGCCACCGGCTGTTCCACGAGGACGGCGAGGAGTTCTTCCTCAGCGGCGCCGACTTCGCCCTGCTCAAGCTGTTCCTCGACCACCCG CAGCAGATCCTCGACCGCGACACCATCGCCAACGCCACCCGCGGCCGCGAGGTGATGCCCCTGGAGCGCATCGTCGACATGGCGGTCAGCCGCCTGCGCC AGCGCCTGCGCGACACCGGCAAGGCGCCGCGGCTGATCCAGACCGTGCGCGGCAGCGGCTACCTGCTGGCGGCGCAGGTCCGCCCGCACCTGGGGCTGTG
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| DNA Sequence for Gene |
>FG99_RS04660
ATGGGCGAGCGGCGGCGCTGGCCGCTGGTCCCGCGCTCGCTGCTGGGGCGCATGCTGCTGCTGACGCTGCTGGCGATCCTCGTCGCCCAGGGCCTGTCCA GCCTGTTCTGGCTCTCGCACCTGCGCTCCAGCCAGCGCGAGGGCCTGCTCACCAGCTCGCGCAGCCTGGCCTATTCCATGGCCGCCAGCGTCAGCTACTT CCGCTCGTTGCCCATCGGCTACCGCCCGCTGGTGCTGGACCAGCTGCGCAGCATGGGCGGCACGCGCTTCTTCGTCTCGCTCAACGAGCGCCCGCTGCAG ATGCAGAGCCTGCCGGACACGCCGAACAAGCAGGCGGTGCTGGACATCGTCCGCGACGTGCTGCAGCAGAAGCTGGGCAAGGACGTGGAGCTGGAAGTGG AATTCGTCGCCCCGGACGACCTGCGCCTGTTCAACAGCCAACTGAAGCTGGAGGAACTGCCGCGCTCCTGGGCCCACTACGCGCTGACCCTGGAGCCGGT GAACCCGCCGGTGCTGGTGACGCAGATCCGCATCGGCGAGAACGAATGGCTCTACATCGCCAGCCTGATGCCGGCGCCCTACGTCAGCCTGGAGCCGGAG GCGCTGCAGCCGCAGCAACTGCTCTCCATCGGCCTGACCAGCCTGTTGCTGCTGCTCTTCGCCGGCCTCTTGGTGCACCAGCAGAGCCGCCCGCTCAAGC GCCTGGCCCGCGCCGCCCGCGAAGTCGCCCTGGGCAGCCCGGCGGCGCCGCTGGAAGAGCGCGGCGCCCGCGAGCTGGTGGAAGTCAGCCGCGCCTTCAA CACCATGCGCGAGAGCATCGACCGCTACCTCAGCGAGCGCGGCCAGCTGTTCAGCGCCATCTCCCACGACCTGCGCACGCCCATCACCCGCCTGCGCCTG CGCGTCGAACTGCTCGACGACGAGCCGCAGCGCGACAAGCTCAACCAGGACCTCGACGAGCTGGAACTGCTGGTCAAGGGCGCCCTGCAATGCGTGAAGG ACACCGACATCCACGAGAACATCGAGCCGGTGGACGTCAACCAGTTGCTACAGCACGTCGCCGGCCCCTACCTGGCCGACGGCCGCGTGAAGCTGCTGGG GGAGGCGGGCGAACCCTATCCCGGCAAGCCCCTGGCCCTGCGCCGCTGCATCGGCAACCTGCTGGACAACGCCCTGAAGTACGGCGAGCGCGCGCAGGTG CAGGTCGAGGACGGCCTGGAAGCGCTGGTCGTGCACGTCGACGACGAGGGGCCCGGGGTGCCGGAGCAGCGGTTGGAGCAGGTGTTCGAACCGCGGGTGC GCTTGTCGCAGCGGGGGCAGGGGTATGGGTTGGGGTTGGGGATCGCGAGGAATATCGCGCATACCCATGGCGGGGAGGTGAGTTTGCAGAACAGGCGGGA AGGGGGGCTGCGGGTGACCTTGCGGTTGCCGAGGTTGGTTGTGGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGACGGTTCTTCTTTCCGACTCCGATATTGCCGGCGTACTCCGTAATTCCATCTCGCAGAGGACAGCTCCCTCTCCCTTCAGGGAGAGGGGGCTTGTCCT GAGCGGCGACAAGTCCGGCGTCAGCCTGAAGCTCAGGAGTTGCCGGCTGACGCCATATCATCAACGCACACCGAACGGCTCCCTCTCCCGCTTGCGGGAG AGGGCTGGGGTGAGGGGCTCTTGGCTCTTCAACCCCAACCCAACCAACCCCCAAATGTCACCACCCCGTGACAATCCACCATCCCTTCGTTACCCGGAGC AGGAAATGCCTTGGATAGACTCGGACTACCGCAAGCGCAGACTTGCCCCGAATAACAAGAACAGGTCCTCCCCCATGAATGCGCTCCGCCGCCTTTCCGC CGCTGTCTGTCTTTCCTCGCTCTATCTCGCCACCCCGGCCCATGCCGGCGAAGTCGAAGTCCTGCACTGGTGGACTTCCCCCGGCGAGGCGCGCGCCGCC
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| Amino Acid Sequence |
>two-component sensor
MGERRRWPLVPRSLLGRMLLLTLLAILVAQGLSSLFWLSHLRSSQREGLLTSSRSLAYSMAASVSYFRSLPIGYRPLVLDQLRSMGGTRFFVSLNERPLQ MQSLPDTPNKQAVLDIVRDVLQQKLGKDVELEVEFVAPDDLRLFNSQLKLEELPRSWAHYALTLEPVNPPVLVTQIRIGENEWLYIASLMPAPYVSLEPE ALQPQQLLSIGLTSLLLLLFAGLLVHQQSRPLKRLARAAREVALGSPAAPLEERGARELVEVSRAFNTMRESIDRYLSERGQLFSAISHDLRTPITRLRL RVELLDDEPQRDKLNQDLDELELLVKGALQCVKDTDIHENIEPVDVNQLLQHVAGPYLADGRVKLLGEAGEPYPGKPLALRRCIGNLLDNALKYGERAQV QVEDGLEALVVHVDDEGPGVPEQRLEQVFEPRVRLSQRGQGYGLGLGIARNIAHTHGGEVSLQNRREGGLRVTLRLPRLVVE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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