Pseudomonas sp. 21, UB43_RS21890

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig9, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCCGGCTCCCCCGAGCCCGGGTTTAGATCGCCCGGTGTTATGAGGGCGAGTTATGAAGTTGAAGGCTTATCTTTTGTATCAGGAGCATTAAGCCCATGA GTATGCAGGACCCGTTAGCAGACATGCTAACTCGCATCCGTAATGCCCAGATGGCTGAGAAGACCGTCGTGAGCATGCCGTCTTCCAAGCTGAAAGCGGC AGTCGCCAAAGTCCTCAAGGACGAAGGTTACATTGCGGATTTCCAAGTCACCGCCGAGGCCAAGCCTCTGCTGTCGATCGAGCTGAAGTACTTCGAAGGC AAGCCTGTCATCGAGGAAGTGAAGCGAATCAGCCGTCCTGGCCTGCGCCAGTACAAATCCGTAGACCAGCTGCCGAAAGTTCGCGGCGGCCTGGGCGTTT CGATCGTCTCCACCAACAAAGGTGTGATGACTGACCGTGCTGCCCGTGCCGCTGGTGTCGGTGGCGAAGTGCTCTGCACTGTGTTCTAAGGGGAATCAGC
DNA Sequence for Gene
>UB43_RS21890
ATGTCTCGCGTTGCTAAGAACCCCGTCATTCTGCCCGCCGGCGTTGAAATCAAGCTGGCTGGTCAGGAACTTTCGATCAAGGGTGCCAAAGGCGCTCTGG AGCTGAAAGTACATCCGTCCGTCGAAGTCATTCAGGACAACGGTGAGCTGCGTTTCGCTGCGCGTAACGGCGACCAGCAGACCCGTGCCATGGCCGGTAC CACCCGCGCTCTGGTCAACAACATGGTAATCGGCGTCAGCCAGGGCTTCGAGCGCAAGCTCCAGCTGGTTGGTGTTGGTTACAAAGCGCAGGCCAAAGGC CAAGTGCTGTCCCTGGCTCTCGGCTTCTCCCACCCGGTTGATTACGAACTGCCTGCCGGCATCGTCGCGGAAACCCCCAGCCAGACCGACATCCTGATCA AGGGTATCGACAAGCAGCTGGTTGGCCAGGTTGCCGCGGAAATCCGCGACTTCCGTCCGCCGGAGCCGTACAAAGGCAAGGGCGTGCGTTACGCCGACGA AGTCGTCCTTCGTAAAGAAGCCAAGAAGAAGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCATAGCAAATGAGCGTCAAGAAAGAAACCCGTCTGCGCCGCGCTCGCAAGGCTCGCCTGAAGATGCGCGAACTGGAAGCCGTACGCCTCTGCGTGTAC CGCTCCTCCCAGCACATCTACGCCCAGGTCATTGCAGCCGACGGCGGCAAGGTCCTGGCCAGCGCCTCGACCCTGGACAAAGAACTGCGCGAAGCTGCCA CCGGCAACGTCGACGCAGCCAAGAAAGTTGGTCAACTGGTCGCGGAACGCGCCAAGGCTGCCGGCGTCACTCAGGTGGCGTTCGACCGTTCTGGCTTCAA GTACCACGGTCGTATCAAGGCCCTGGCTGATGCCGCTCGTGAAGGCGGTCTGGAGTTCTAAGTTATGGCAAACAACGATCAAAAGCGCGACGAAGGCTAC ATCGAGAAGCTGGTTCAAGTGAACCGCGTCGCCAAAACCGTAAAAGGTGGCCGTATCTTCGCCTTCACCGCGCTGACCGTGGTTGGCGATGGCAAGGGCC
Amino Acid Sequence
>50S ribosomal protein L6
MSRVAKNPVILPAGVEIKLAGQELSIKGAKGALELKVHPSVEVIQDNGELRFAARNGDQQTRAMAGTTRALVNNMVIGVSQGFERKLQLVGVGYKAQAKG QVLSLALGFSHPVDYELPAGIVAETPSQTDILIKGIDKQLVGQVAAEIRDFRPPEPYKGKGVRYADEVVLRKEAKKK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site