Pseudomonas sp. 21, UB43_RS21350
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 21 contig9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGATCTCGACGACCGTGTCGACCATCTGCACCGAGCCGAGCATGCCCAGCTTGACCGCCGCCACCGGCAGGTCGGCGATCACCGCGTTGGCCTGGGCCAG CACCCACTCGCGGTCGAGCACGCGGAAGTCGGAAACGTTGACGGTATCCTGAACGGTCAGTGCGGTGACGGTGGGCGCCGCGTGGCAGCCTTGGGCGATC AGGGCTTCGATATCGGCCTGCAGGCCGGCACCGCCACTGGGGTCGTGGCCGGACAGGCAGAGCACTACGGGACGGGAGGCAGGTGTTTTCATGGCGCGGG AGCTTATCACCAAAATGCGCTGCTGAGCTGACCGAACGGTCCAATGCCCATCGCCCGGCCACGCCCTGCCCGAATGGTCGAATGCCACGGGGCACAAGGC CTGTGCTAGAGTTCGCCGATTCCAACACAACGCCTCCACGGCGCGCCAAGGCAGGGGATGGGGATCTCCGGCGCAGCTGTCGGCGGCACTGCGGGGCACC
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| DNA Sequence for Gene |
>UB43_RS21350
ATGCGGCACTGGCTGATCTTCCTGATCCTTCTCATCCTCTCGCCAGTGGCGAGCGCCATCAGCTTCGACGAGCGCGTCGGGCAATTGCCGCTCGGGCGGG CGATGGATGTCTTCGAGGACGTGCGCGGCACGGCCGATATCGCCGAGATCAGCTCGCCGGCGCTGGCCGCCAGTTTCCGCCACCATGAGCGCGACGTGCT CAATGCCGGCTATTCGCGCTCGGTGTTCTGGTTGCGCCTGGACCTGGACTACCAGCCCAAGGCCTCGAGCGACCCGGCCAATTGGCTGCTGGAGCTGGCC TACCCGCCGCTGGACAAGCTCGACCTGTACCTGCCCGACGGCCAGGGCGGTTTCAGGCTGGCCCAGCGCACCGGCGACACCCTGCCGTTCGGCAGCCGGC CGATCCGCCAGAACAACTACCTGTTCGACCTCAAGCTGGAGCCGGGCAAGCCGCTGCGCGTCTACCTGCGCCTGGAAAGCCAGGGCTCGATCCAGGCGCC GCTGACGCTCTGGTCGTCCAAGGCCTACCTGGAAGAGCAGCCGGGGCGCATCTATGTGCTGGGCATCATCTATGGCGTGCTGCTGGTGATGCTGATCTAC AACCTGTTCATCTTCCTCAGCGTCCGCGACACCAGCTATCTCTATTACATCCTTTATATAGCCTCGTTCGGCTTCTACCAGATCTCGGTCAATGGCGCCG GCATCGAGTACTTCTGGCCGAACAATCCCTGGTGGGCCAACGCCGCCACGCCGTTCCTGATCGGCTCGGCCGGTCTCTTCGGCTGCCAGTTCGCCCGTAG CTTCCTGCATACCCGCGAGCACAGCCTGTGGATCGACCGCATCCTGCGCGTACTGATGGGCGTCGGCGCGCTGGTGATGGTGCTGGCGCTGACTGTCAGC TACGCCATCGCCCTGCGGCTGGCCACCTACCTGGCGCTGGCCTTCACCGTGGTGATCTTCACCGCCGGCATCGTCGCCTGGCTGCGCGGCATGCGCGTGG CGCGTTACTTCATCTTCGCCTGGAGCGCATTCCTGCTCGGCGGGGTCATCAACACGCTGATGGTGCTGGGCTTCCTGCCCAACATCTTCCTCACCATGTA CGCCAGCCAGATCGGTTCGGCGCTGGAGGTCGGCCTGCTGTCCCTGGCACTGGCGGACCGCATCAATGCCATGAAGGAGGAGCGCACGCGCATCCTCCAG GAAACCAGCCGCAAACTGGAACAGCTGAACCTGGAGCTGGCCAGCAGCAACCGCCTGAAGGACGAATTCCTCGCCACCGTCACCCATGAACTGCGCACGC CCATGAGCGGGGTGATCGGCTCGCTGGAGCTGATGCAGACGGTGCCCATGGACATCGAGTTGGCGCAGTACCACAAGACCGCCACCGGTTCGGCGCGCGA CATGATGCGCATGGTCAACGACATCCTCGCGCTGATCGAGCTGCAGGCCGGCAAGCTCTACCCGCGCCGCGAGCCTTTCAGCCTGCGCGGCCTGTGCGAC GGCCTGCGCGCTCAGTACGCGCCGCGTGCCGAGGAGCGCGGGCTGCGCTTCGTCCTGCAACTGGACGAGAGCCTGCCGGACACCCTTGAAGGCGACGCCG GCAAGCTGACCCAGGCGCTGGGCTACCTGATCGACAATGCCATCAAGTTCACCCACCAGGGTGGCGTGCACCTGCGGGTGGAGGGTGTGCCGAACAATGA AGGCCTGGTGCTGCGCATCGAGGTGCAGGATAGCGGCATCGGTTTCTCCACTCCGCCGGATGGCGCGCTGTACCAGCGCTTCTTCCAGCTCGACGGGTCT CTGACCCGCGAGTACGGCGGCCTCGGTATTGGCCTGGCGCTCACCCGCAAGCTGGTCGCGCTGCTGGGTGGCACGCTGACCCACGAATCCGTGCCGGGGC AGGGCAGTCGCTTCGCCCTGGAGCTGCAGGTCGGCCAGCCGGTGCAGGGCATCGCCCCGCCGCCGCGTCGCGCGGGCGGCCAGGTGCTGCGCAGCCCTGA CCAGTGCACCGTGCTGGTGGTGGAAGACAACGCCATCAACCAACTGGTGATCCGCGGCATGCTGCTCAAGCTCGGCTATCGCGTACGCACGGCCGACAAC GGCGCCGAGGCCATCGAACTGCTGCGCCGGGAAGCCATCGACACCGTGCTGCTGGACTGCCAGATGCCGGTGATGGACGGCTTCGCGACCTGCCGGGCGA TCCGCACGTTGCCGCGGTGCGCCGACCTGCCGGTACTGGCGATCACGGCTCACAGCCACAGCGGCGACCGTGAGCGCTGCCTGGCGGCGGGGATGAGCGA CTACATGGCCAAGCCGGTGAAGTTCGAGGAGCTGCAGGCGCTGCTGCACGACTGGCTGCTGTGCCAGCCGGCACTGCCCAGCCCGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTTCGGTCCTGTGCGGGGGCTTCGTCTGCGATAGCCTCGTGCCATTCGGTTCGCGAGCAAGCTCGCTCCTACAGGCCTGCTCCGGCGCGCTCTTCGTAG GAGCGNGCTTGCTCGCGAACGGTCCGTGCGGCGGAGTGATGACTCCTGCGCACAATCGAATGAAAAACGCCGCGATCCCTTTCGGTATCGCGGCGTTTGC GTTTCAGCGAGTAGTCAGGCTCAGACCTTGACGACCCAGCCTTGCGGGCCTTCCACGTCACCCTTCTGGATGCCGGTCAGCTCTTCGTAGAGGCGACGGG TCACCGGGCCGACGTCTTCGCGGCTGAAGAACACGTGCAGGTTGTCCTTGTACTGGATGCCGCCGATCGGGGTGATCACCGCTGCGGTACCGCAGGCGCC GGCTTCCTTGAAGCGGGCCAGGTCGTCGATCTGCACGTCGCCTTCGACCACTTTCAGGCCCAGGCGCTGTTCGGCCAGTTGCATCAGCGACAGGCGGGTA
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| Amino Acid Sequence |
>histidine kinase
MRHWLIFLILLILSPVASAISFDERVGQLPLGRAMDVFEDVRGTADIAEISSPALAASFRHHERDVLNAGYSRSVFWLRLDLDYQPKASSDPANWLLELA YPPLDKLDLYLPDGQGGFRLAQRTGDTLPFGSRPIRQNNYLFDLKLEPGKPLRVYLRLESQGSIQAPLTLWSSKAYLEEQPGRIYVLGIIYGVLLVMLIY NLFIFLSVRDTSYLYYILYIASFGFYQISVNGAGIEYFWPNNPWWANAATPFLIGSAGLFGCQFARSFLHTREHSLWIDRILRVLMGVGALVMVLALTVS YAIALRLATYLALAFTVVIFTAGIVAWLRGMRVARYFIFAWSAFLLGGVINTLMVLGFLPNIFLTMYASQIGSALEVGLLSLALADRINAMKEERTRILQ ETSRKLEQLNLELASSNRLKDEFLATVTHELRTPMSGVIGSLELMQTVPMDIELAQYHKTATGSARDMMRMVNDILALIELQAGKLYPRREPFSLRGLCD GLRAQYAPRAEERGLRFVLQLDESLPDTLEGDAGKLTQALGYLIDNAIKFTHQGGVHLRVEGVPNNEGLVLRIEVQDSGIGFSTPPDGALYQRFFQLDGS LTREYGGLGIGLALTRKLVALLGGTLTHESVPGQGSRFALELQVGQPVQGIAPPPRRAGGQVLRSPDQCTVLVVEDNAINQLVIRGMLLKLGYRVRTADN GAEAIELLRREAIDTVLLDCQMPVMDGFATCRAIRTLPRCADLPVLAITAHSHSGDRERCLAAGMSDYMAKPVKFEELQALLHDWLLCQPALPSPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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