Pseudomonas sp. 21, UB43_RS20730

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTTCGAGGAGCTCAACCGCACCGCGCTGGCCAAGCATGCGGGCGGTTCGGTGTACGATAGCGAGCTCGAGCTGGAACATGGCCGCTATCTGTACAAGGTC GACATCAAGGACGCCCAGGGCGTGAAGTGGGATGTCGAACTGGATGCGGTCACCGGCGAAGTCCTCACCGATCACCAGGATGACTGATGAAGACCGTTCT GCCACGCGTGGCTTTGCTTGGCCTGGCGCTCGTTGCCCTGGTTGGCGTCGCGCAAGCCCATGACCTCAGCCAGGACGAAGCCTTGCGCCTGAGCAAGGAA GGAGTGATCCGCCCCTTCGAGGAAATCCTTCCCGCCGCGCTGAGTCGCTATCCCGGCTCGCGCCTGCTCGAAGCAGAGCTGGAGAGGGAGCACGGCAACT ACATTTATGAAGTGGAACTGCTCACTGTCGACGGCGTGGTACGCGAACTGGAATTGGATGCCCGCGACGGCCGCATCCTCAAGGATAAGGAAGACGACTG
DNA Sequence for Gene
>UB43_RS20730
ATGCGCCTGCTGCTGGTGGAAGACCACGTACCCCTGGCCGATGAACTGCTGGCGACCTTGACCCGCCAGGGCTACGCGGTGGACTGGCTGGCCGACGGCC GCGACGCTGCCGTGCAGGGCGCCAGTGAGCCTTACGACCTGGTGATTCTCGATCTTGGCTTGCCGGGCCGCCCTGGTCTGGACGTGCTGCAGGAGTGGCG CGGCATGGGCCTGGCGACGCCGGTGCTGATTCTCACCGCGCGGGGCTCCTGGGCCGAACGTATCGATGGCCTGAAGGCCGGCGCCGACGACTACCTGACC AAGCCGTTTCATCCCGAGGAACTGCTGCTGCGCATCCAGGCGTTGCTGCGGCGTGCCCGCGGGCTGGCCAACCAGAGCCAGCTGGAAGTGGCAGGGCTGA GCCTGGACGAGTCGCGCCAGTGCGTGCAGCAGGGCGGCAAGGAGGTCGACCTGACGTCCGCCGAGTTCCGTCTGCTGCGTTACTTCATGCTGCACCCCGG CCAGCTGCTGTCGAAATCGCACCTGGCCGAGCACCTGTATGACGGCGAGACCGAGCGCGACTCCAACGTCATCGAGGTCCATATCAACCACCTGCGCCGC AAGCTCGGCCGCGAGATCATCGAGACCCGCCGCGGCCAGGGCTATCGCTTCACCGGCAACGGAGTTGGCCGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGTCGATCCAGCGCCGGCTCGGCCTTGGGCTTGGCGTGGTGTTGGTGGTGATTGGTCTGGCACTGGCGCAGGCCGGCCTCTGGCTGTTCGACCAGGGCTT GCGCCGCTATCTGGTGAACGGCCTGCAGGACGAGGCGGAAAGCCTGCTGGTGGGCATCACTCGTGGCCCCGCGGGGTTGCAGCTTGACGGCCAGCGGGTC GATGCCGCCTATGAGCGGTTGTTCTCCGGGCGCTACTTCGTCATCCGCTTCGACGAGCAGACCTGGCGTTCGCGCTCTCTGTGGGACAACGAGCTGAGGC TGCCCTCGCACAAGGGGTTGGCCAAGGCGCTGGAGAAAGGTCCGGAAGGCCAACGCCTGCTGGTGTATCGCGGCGACTACAAGCGCTACGGCAAGAAGCT CAATATCGTCGTCGCGCAGGATTACACGCCCGTTCTCAAGAGCTTCAACCGCCTGCGCAACATCGGTCTGGGCGCTGGTGCACTGGCGTTGCTGCTGATC
Amino Acid Sequence
>transcriptional regulator
MRLLLVEDHVPLADELLATLTRQGYAVDWLADGRDAAVQGASEPYDLVILDLGLPGRPGLDVLQEWRGMGLATPVLILTARGSWAERIDGLKAGADDYLT KPFHPEELLLRIQALLRRARGLANQSQLEVAGLSLDESRQCVQQGGKEVDLTSAEFRLLRYFMLHPGQLLSKSHLAEHLYDGETERDSNVIEVHINHLRR KLGREIIETRRGQGYRFTGNGVGR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site