Pseudomonas sp. 21, UB43_RS19400

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCGGTGTTGCTCTCGTGGGTCAGCCAGTGCACCCGCGCGGCACCGTTGGCGCGGGCGTCGGCGTACACGTGCTCGATCAGCTGCGCGCCGATGCCACCG CCGCGCTGGCCTTCGGCGACGTACAGGTCCTGCAGGTAGACGTAGTCGCCCTGGGTCCAGCAGGAGCGGTGGTAGATGAAGTGCACCAGGCCGATGGCGG TGCCATCGCGCCAGGCGAGGGCGGCGTGCATCGGTTCGGCCGCATCGAGGAAGCGCTGCCAGGTGACGGCGCTGGTGGCCTCGTCGATGGTGGTCTTGTA GAAGCGCTGGTAGCCCTGCCAGAGCGGCAGCCAGGCGGCGTGATCATCGGCGGTGATCGGGCGGATCTCGACAGCGGAAGACATGGTGATGGCCTTGTGT GCGTTGGAATGCTTCCAGCCTAGGTCGGTAATTGGTTCTGCTAAAGAGCCATTCATGATCAAATCAAAGGAACCATTGCCGACTTCCCGGAAGCCGCTCC
DNA Sequence for Gene
>UB43_RS19400
ATGAGTGTTCCTCTGCCTTTCAACCCGTCCGGCATCCGCCTCGATCCTGCCCGGCCGCTGGGCGTTCAGCTGTTTCAGGCGTTGCGCGAGCGCATCCTCG ATGGTCGCCTCGCGGCGCGCTCCCGGCTGCCGGCCAGCCGTGATCTGGCTGCTTCGCTGGGTGTTTCCCGCAATACCGTGGTGCGCGCCTACGAGCAGCT CTACGCCGAAGGTTACATCGAAGGCCGCACCGGCGATGGCACCTACGTGGCGGAACGGGTTCAGCCCTCGGTCGATGCGGTTCGTAGCGAAGCACGCAGC CCGGATGCGCCTTCGCTGGAGCGCCTCGCGCGGCATCATCTGCCGCTGCCGCCCACCGGCGCGCCACGGGCATTCCGGGTCGGCGTGCCGGCCTTCGACC TCTTCCCCTTCGATACCTGGGCACGGCTGCAGGCGCGCTTCTGGCGCGATCCGCCGCTGGATTGCCTGGGCTACGGCGACCCGGCCGGCGAGCAGCGCCT GCGCGAGCTGGTCGCCGCCTACCTGCGTACTACCCGCGGCCTGCATTGCGATGCCGGGCAGATCATCATCACCAGCGGCGCCCAGCAGGGCATCGCGCTG TGCGCCCAGGTGCTGCTCGCCGAGGGAGACGGCGCGGCCATCGAGAACCCCGGCTACCGCGCCGCCGGCCATGCCTTCGCCACGGCCGGCGCGCGCCTGC ACGGCGTACCGGTGGATGCCGATGGCCTCTGCACGGAACGGCTGGCGCAGTTGCCGGACTGCCGGCTGGTCTACGTCACGCCTTCGCACCAGTACCCCAC CGGCGTGACCCTGTCGCTGGCGCGGCGCCTGGAGCTGCTGGAGTGGGCCGAGCGCAGCGGCGGCTGGATCGTCGAGGATGATTACGACGGCGAGTATCGC TACAGCGGTACGCCGCTGATGCCGCTGGCCGCGCTGGATCGCCATGACCGCGTCCTCTACGTCGGCACCTTCTGCAAGATCGCCTTCCCTGCGCTGCGCC TGGGCTATCTGGTCGTCCCGCCGGCGCTGGCGCAGGCCTTCGCCCGCCGCCGCGCGCTGGACGTGCGGCACTCGGAAGTTGGTACCCAGCGGGTGATGGC GGACTTCATCGCCGAAGGGCATTTCCAGCGGCATGTCCGCCGCATGCGCAGGGCCGCCCGCAGCCGCCGTGACGCGCTGCTGCGTGGCTGGCCGGAGGTG GCCGGCTGCGCGCCGATGCCGGCGGTGGACGCGGGATTGCACCTGTGCGTGCGGGTCGACAGCCGCGAGCGCGAGCTGGAACTGGTGCAGCGCGCGGCGG CGGTGGGCGTCGAGGTGAACGCCCTGAGCGATTACTGGCTGCCGGAGTCCGCCGAGCCGGCGGATCTGCGGGCCGGGCTGGTGCTGGGTTTTGCGGCGGT GCCGGAGGCGCGGATCGCCGAGGCGTTGAAGGCATTGCGCAAGGTTTGGACAATCAGGAGCCCCTCTCCCCAGCCCTCTCCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGGGAGAGGGAGCCGTTCAGCTTTCACGGATACGACAGCGTCGGCCGGCGGTCGCCGAGCTGCTGCCTATGCTGCGAGCCGGAGCTATTGGCCTTCCCCG CGATCACCGTCGCTCTAGTCCCCTCTCCCTTCGGAGCGGGGCTCGCTGCCAGGGTTAGGGAGAGGGAAGCGAACTTTGCGCTGAAGACGAAGGTGGGGTG AGGCCCATACATCTTGTAACGCCCGGCTATTTGCTTAGCTGCCTTACGAAGTTGGCGAGAGGCACTACGCTCCCTAAAATACCGCCCCTCTCGAAAATAC CCCGGAGCCGCCATGAGCCTAGCCCTGTCCACCGTCCCCGAGCGCAAGTCCTCTGCGTCCTGGGTCGCCTTCCTCCTCCTGCTGGCGGGCGCGCTGTTCC TCGCCCAGGTGGTGAGCGGCCGGCAGGCCCTGCTGTTCCTGGTCGGCGGCGCGCTGGGGCTGACGCTCTACCACGCGGCTTTCGGCTTCACGTCCGCCTG
Amino Acid Sequence
>GntR family transcriptional regulator
MSVPLPFNPSGIRLDPARPLGVQLFQALRERILDGRLAARSRLPASRDLAASLGVSRNTVVRAYEQLYAEGYIEGRTGDGTYVAERVQPSVDAVRSEARS PDAPSLERLARHHLPLPPTGAPRAFRVGVPAFDLFPFDTWARLQARFWRDPPLDCLGYGDPAGEQRLRELVAAYLRTTRGLHCDAGQIIITSGAQQGIAL CAQVLLAEGDGAAIENPGYRAAGHAFATAGARLHGVPVDADGLCTERLAQLPDCRLVYVTPSHQYPTGVTLSLARRLELLEWAERSGGWIVEDDYDGEYR YSGTPLMPLAALDRHDRVLYVGTFCKIAFPALRLGYLVVPPALAQAFARRRALDVRHSEVGTQRVMADFIAEGHFQRHVRRMRRAARSRRDALLRGWPEV AGCAPMPAVDAGLHLCVRVDSRERELELVQRAAAVGVEVNALSDYWLPESAEPADLRAGLVLGFAAVPEARIAEALKALRKVWTIRSPSPQPSP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site