Pseudomonas sp. 21, UB43_RS18815

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.1490.20
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain 152 284 1.7E-33
SUPERFAMILY SSF56059 Glutathione synthetase ATP-binding domain-like - - 480 693 1.24E-30
Gene3D G3DSA:3.40.50.720 - - - 3 126 4.4E-27
SUPERFAMILY SSF52210 Succinyl-CoA synthetase domains IPR016102 Succinyl-CoA synthetase-like 292 455 4.45E-20
Gene3D G3DSA:3.40.50.261 - IPR016102 Succinyl-CoA synthetase-like 290 460 5.5E-23
SUPERFAMILY SSF52210 Succinyl-CoA synthetase domains IPR016102 Succinyl-CoA synthetase-like 129 286 1.83E-31
Pfam PF13380 CoA binding domain IPR003781 CoA-binding 25 130 1.9E-10
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 6 127 1.61E-24
Gene3D G3DSA:3.30.1490.20 - IPR013815 ATP-grasp fold, subdomain 1 499 575 1.0E-59
PANTHER PTHR43334 ACETATE--COA LIGASE [ADP-FORMING] - - 1 693 4.2E-115
Gene3D G3DSA:3.30.470.20 - - - 480 691 1.0E-59
Pfam PF13549 ATP-grasp domain - - 472 693 1.0E-55
SMART SM00881 CoA_binding_2 IPR003781 CoA-binding 9 99 3.8E-19
Gene3D G3DSA:3.40.50.261 - IPR016102 Succinyl-CoA synthetase-like 127 287 4.1E-32

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.