Pseudomonas sp. 21, UB43_RS15680

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCGAGCTCTACGAGCACCCGCGCAACTCCTTCGTCGCCAACTTCATCGGCGAGAACAACCGCATCGCCGGCCAGCTCCAGGCCCGCGATGGCGACCGCT GCACCGTCGGCTTGGCCCGTGGCGAGAAGGTCGAGGCGCTGGCGGTCAACGTCGGCAATGTCGGCGACACCGTCAGCCTGTCGATCCGCCCCGAGCGCGT GCGCCTGAACGGCCACAGCGAAAACTGCGCGAACCGCTTCTCCGGCCGCGTCGCCGAGTTCATCTACCTGGGCGACCACGTGCGCATTCGCCTGGAGGTC TGCGGCCGTACCGATTTCTTCGTCAAACAGCCGATCGCCGAGCTCGATTCCGCGCTCAGTGTTGGCGACGTGGTTCCGCTGGGCTGGGAAGTCGAGCACG TCCGCGCGCTCGACCCACTGTCCGCGGCGTAACAGCGCGGCCCGGCCACTCCCGGACGCATCCAAGAAAAACAAACCTGCACACTGTGGAGACAACAATA
DNA Sequence for Gene
>UB43_RS15680
ATGTCGAAGTCCTTGAAAGCATCGGGGCTCAAACTCGCAGCGCTGACTCTGGGCGTGGCCTTCGCGGCCCAGTCCATGGCTGCCACCGACCTGACCGTGG TGTCCTTCGGCGGCGCCAACAAGAACGCCCAGGTGAAGGCGTTCTACGGCCCCTACGAGAAGAGCAGCGGCAACAAGATCGTCGCCGGCGAGTACAACGG CGAGATGGCCAAGGTGAAGGCCATGGTCGACACCAACAGCGTCTCCTGGGACCTGGTGGAAGTCGAGTCGCCGGAACTGGCCCGCGGCTGTGACGAAGGC CTGTTCGAAACCATCGACCCGGCCATCCTCGGCAAGGCCGAAGACTACGTACCGGGCGCCGTGAGCAACTGCGGCGTGGGCTTCTTCGTCTGGTCCACCG TGCTGGCCTACAACGCCGACAAACTGAAGACCGCGCCGACCAGCTGGGCCGATTTCTGGGACACCCAGAAGTTCCCGGGCAAGCGTGGCCTGCGCAAGGG CGCCAAGTACACCCTGGAATTCGCCCTGATGGCCGACGGCGTCGCGCCCAAGGACGTCTACAAGGTGCTGGCCACCAAGGAAGGCCAGGATCGCGCGTTC AAGAAACTCGACCAGATCAAGCCGAACATCCAGTGGTGGGAAGCCGGCGCCCAGCCGCCGCAGTACCTCGCTTCCGGTGACGTGGTCATGAGCTCCGCCT ACAACGGCCGCATCGCCGCCGTGCAGAAAGAGAGCAACCTGAAGATCGTCTGGAACGGCGGCATCTACGACTTCGACGCTTGGGCCATCCCGAAAGGCGC CAAGAAAGTCGACGAGAGCCTGAAGTTCATCGCCTTCTCGGTTCAGCCCGAGCAGCAGAAGACCTACTCCGAAAACATCGCCTACGGCCCGGTCAACAAG AACGCCGTACCGCTGCTGAGCAAGGACCTGCTGAAAGACATGCCGACCACCCCGGAAAACATGCAGGGCCAGGTCGGCATGGACGTGACCTTCTGGGCTG ACTACGGCGAGCAGCTGGAACAGCGCTTCAACGCCTGGGCCGCCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAAGCCCTTACCGCCACGGCCGCCCGGACCGTGGCGGACCGGAACCGCTGCTCCCCCTCGCGGCGGTTCCTCCTGACACCACACCTTGGCCGCCCTCGG GCGGCCCGTTTTACCGGAGTTCGCTATGGCCACCGCTGTGTCGATGAACGAGGTCGCCGGCCCCACCCTCAAGCAGCGCCTGGCGCGCGCGGAGCGGATG AACCGCCTGAAGTCGCAGGCGCTGGTCCTGCCCCTGCTGGTCTTCCTCCTGCTGACCTTCCTCGTGCCCATCGCGGCACTGCTCTACAAGAGCGTGAACA ACCCCGAGGTCGTCGGTGCGCTGCCGCTGACCGTCAACGCCATTTCCGCCTGGGACGGCAAGTCGCTGCCCTCGGACGAGGTGTACAAGGCGCTGAGCGA CGACCTGGTCGCCGCGCGCAAGAACCAGACCATCGGTGACCTGTCCAAGCGCTTGAACATGGAACTGGCCGGCTACCGCAGCCTGTTGTCCAAGACCGCT
Amino Acid Sequence
>spermidine/putrescine ABC transporter substrate-binding protein
MSKSLKASGLKLAALTLGVAFAAQSMAATDLTVVSFGGANKNAQVKAFYGPYEKSSGNKIVAGEYNGEMAKVKAMVDTNSVSWDLVEVESPELARGCDEG LFETIDPAILGKAEDYVPGAVSNCGVGFFVWSTVLAYNADKLKTAPTSWADFWDTQKFPGKRGLRKGAKYTLEFALMADGVAPKDVYKVLATKEGQDRAF KKLDQIKPNIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAVQKESNLKIVWNGGIYDFDAWAIPKGAKKVDESLKFIAFSVQPEQQKTYSENIAYGPVNK NAVPLLSKDLLKDMPTTPENMQGQVGMDVTFWADYGEQLEQRFNAWAAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site