Pseudomonas sp. 21, UB43_RS15325

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig5, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATTTAAATTATTGATCGAAGGCGAAATATCGATTGACAAGACCTTTCACATCCGTAGAATGGCCGGCGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGC TCATAACCCGAAGGTCGTAGGTTCAAATCCTGCTCCCGCAACCAGACACAGAAAAAGGGTCACTCTCCGGAGTGGCCCTTTTTCGTTTGCGCGCGTTTAA ATTATTGATCGAAAACGAAATATCGTTTGACACAAGGCTTCATATCCGTAGAATTGCCGCCGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAAC CCGAAGGTCGTAGGTTCAAATCCTGCTCCCGCAACCAGACATCAAGAAGAAAGCCACTCTTAGGAGTGGCTTTTTTCGTTGTGCGCAAAAAATGATCGCC CACGGGTGGCGTCTCACGGATCAGGAAAATACTCTTCCGGGGACTTGGGAATTCGCGTCAGTGCCCCTACTCTGTCGCGCTAAATCGATTGAGGTGCCCG
DNA Sequence for Gene
>UB43_RS15325
ATGAGCGCCAACCCCGCCACACCCGATACCCCTGCCACCGAGGACGCTCCCAGCCGAGCGACCTGGCTCAACTGGGTGAACGCCAACCGCCAGGCACTCG GCCTGGGCGTGACCCTGGTGCTGTTCAGCCTCGCATTGATCGCCTGCTATCACCTGCTGCGCGACATCGACGCCTACTCCCTGCACGACGCCCTGCTCGA CGTGCCCACCACCTCGCTGCTCGGCGCCTTCGCCGCCACTGTGGTCGGCTTCATCTTCCTGCTCGGCTATGAATGGTCGGCCAGCCGCTTCGCCGGCGTG AAGCTGCCTGTCCCGGCGCTGCTGACCGGCGGCTTCTCCGCGTTCGCCATCGGCAACGCCGTGGGCCTGTCGATGCTTTCCGGCGGGTCGGTGCGCTATC GCCTCTATGCCCGCCAGGGACTGGGCGCCGGCGACGTCGCGTTGATGACGCTGTTCGCCAGCCTGTCACTGGGCTGCGCGCTGCCGGTGCTGGCCGCGCT CGCCGCGTTGAGCGACCTCTCCGATGCCTCCCTGGCCCTGCACTTGCCGGAGTGGCTGGTGGCGGTGCTGGCACTGGGCATCATCGCCCTCTGCCTGATG CTGGTGGTTGCTGTCGAACGCCGCCGCCTGCCGGAACAGCCTTCCCCCGACAGCCACCTGGTTCGCCTGGGCCGCCGCACCCTGCGCCTGCCGGGCCTGC GCCTGTCGCTGCTGCAATTGCTGATCACCGCGCTGGACGTGGCCGCTGCCGCCACCGTGCTCTACCTGCTGCTGCCGGAAGCCCCGCCCTTCGGCGCCTT CCTGCTGGTCTACCTGATCGCCCTGGCCGCTGGCGTGCTCAGCCATGTGCCGGGCGGTGTGGGCGTATTCGAAGCAGTGCTGCTGGCAGCCTTCGCCAAC CAGCTGGGCGCCGCCCCGCTGGCTGCCGCACTGCTGCTGTATCGCCTGATCTACGTGGTCCTGCCGCTGATCGTCGCCTGTCTGTTGCTGCTGTTCCTTG AAGCCCGCCGCGTGCTGGTGGCCAAACAGGCGGTACGCATCACCTCCGGCTTCGCCGCGCAGATTCTTTCCCTGCTGGTGTTCATCTCCGGCGTCGTGCT GCTGTTCTCCGGCGCCACGCCGTCCATCGACACCCGCCTGGACGAAGTCGGCTTCCTCGTGCCGCACCGCCTGATCGATGCCTCGCACCTGGCCGCCAGC CTGATCGGCGTGCTCTGCCTGCTGCTCGCCTACGGCCTGCGCCGCCGTCTCTCCGCCGCCTGGGCGCTGACCCTGGGCCTGCTGATCGCCGGCGCCGCCC TGTCGCTGCTCAAGGGCTTCGACTGGGAAGAAGCGCTGATCCTCAGCTTCACCGCCGCCCTGCTGGTGATCTTCCGCAGCGCCTTCTACCGCCGCAGCCG CCTGATGGACCTGCCCTTCTCGCCGCTGTACCTGGGTGCAGCCGCGTGCGTGATCGCCGCGTCGATCTGGCTGCTGCTGTTCGCCTACCAGGACGTGCCG TACAGCCACGAACTCTGGTGGCAGTTCGCCCTGGACGCCGACGCGCCGCGCGGCCTGCGCGCCGCGCTGGGCAGCTGCCTGCTGCTGGCCGCTCTGGCGC TGTACTGGTTGCTGCGCACCGCGCCACCGGCCATCCATGCGCCGACTCGCGAGGACCTGGACACCGCCGCCGGCATCCTGGCCAATTCCGCGCAACCCGA CGGCGGCCTGGCCCTGTCCGGCGACAAGGCGCTGCTGTTCCACGAGGGCAACGACGCCTTCCTGATGTACGCCCGCCGCGGCCGCAGCCTGGTGGCGCTG TTCGATCCGGTCGGCCCGGCCCAGGCCCGCGCCGAACTGATCTGGCAGTTCCGCGACCTCTGCGACCTGCACCACGCGCGCCCGGTGTTCTACCAGGTGC GCGCCGAGAACCTGCCGCTGTACATGGACATCGGCCTGACCGCGCTCAAGCTCGGCGAGGAGGCCAGGGTCGACCTGCGCCGCTTCGACCTGGAGAGCAA GGGCAAGGAGATGAAGGACCTGCGCTACACCTGGAACCGCGGCCAGCGCGACGGCCTGAGCCTGGAGTTCCATGACGCCGGCAACGCGCCGATGGACGAG CTGCGCGCCATCTCCGATGCCTGGCTGGGCGGCAAGAACGTCCGCGAGAAGGGCTTCTCCCTCGGCCGCTTCACCCCCGAATACCTGCGCTACTTCCGCG TCGTGGTGGTCCGCTTCCAGGGCCGCGCCGTGGCCTTCGCCAACCTGCTGGAAACCTCCGGCAAGGAACTGGCGAGCATCGACCTGATGCGCGTGGCCCC CGACGCACCCAAGCTGACCATGGAGTTCCTCATGCTCGGCCTGATCCTGCATTACAAGGAGAGCGGGCACACCCGCTTCAGCCTCGGCATGGTGCCCCTG GCCGGCTTGCAGCCGCGTCGTGGCGCCCCGCTGACCCAACGTCTCGGCGCGCTGGTTTTTCGCCGGGGTGAGCAGTTCTACAATTTCCAGGGGCTGCGGC GCTTCAAGGACAAGTTCCAGCCCGACTGGGAACCCCGTTACCTGGCCGTGCCCGCCGGACTGGATCCGCTGGTGGCCCTGGCCGATACGGCCGCCCTCAT CGCAGGCGGCCTGAGTGGATTGGTAAAACGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TATGTTGAAACGACGCTGGCGACACCTGCTCGCCCTCCTCCTGCTGGTCATCATCGCCGTGGGTCTGCTGCTGTGGAGCCGCCCGGCTTCCCAGGCCGCC CTGGAACACCGCCAGTTGCCCGACGGCAGCGCCGTCAGCCTGGCCATCCCCGGCAAGGCCCCGAATGCCCGCGTGCTGCTGGCCGTGCAGGCCGACCAGA AACTCGACGACGGCCAGCTGCTGGCCCTGGCCCACGACAGCGGTGCCCGCGTGGTGCAGTTCGTCTTCCCGGACAAGGACTGCGCCACCCAGCAGGCCCG CATCAAAGCTGCCGGCGAGCTGCTCGACGGCCAGCCGACCCTGGTCGCCGGCATCGGCCCGGGCAGCGCCTGGGCCTTCCGCTGGCTTGCCGGGCAGACC GACGACAAGGCCAAGGCGCTGTCGGTCGGCTTCTCCCTGGAGAAACCCGACTGCGCCGCCACCCCGCTGCCGACGACTGCCGCCCACGGCCACTGGCTCG
Amino Acid Sequence
>membrane protein
MSANPATPDTPATEDAPSRATWLNWVNANRQALGLGVTLVLFSLALIACYHLLRDIDAYSLHDALLDVPTTSLLGAFAATVVGFIFLLGYEWSASRFAGV KLPVPALLTGGFSAFAIGNAVGLSMLSGGSVRYRLYARQGLGAGDVALMTLFASLSLGCALPVLAALAALSDLSDASLALHLPEWLVAVLALGIIALCLM LVVAVERRRLPEQPSPDSHLVRLGRRTLRLPGLRLSLLQLLITALDVAAAATVLYLLLPEAPPFGAFLLVYLIALAAGVLSHVPGGVGVFEAVLLAAFAN QLGAAPLAAALLLYRLIYVVLPLIVACLLLLFLEARRVLVAKQAVRITSGFAAQILSLLVFISGVVLLFSGATPSIDTRLDEVGFLVPHRLIDASHLAAS LIGVLCLLLAYGLRRRLSAAWALTLGLLIAGAALSLLKGFDWEEALILSFTAALLVIFRSAFYRRSRLMDLPFSPLYLGAAACVIAASIWLLLFAYQDVP YSHELWWQFALDADAPRGLRAALGSCLLLAALALYWLLRTAPPAIHAPTREDLDTAAGILANSAQPDGGLALSGDKALLFHEGNDAFLMYARRGRSLVAL FDPVGPAQARAELIWQFRDLCDLHHARPVFYQVRAENLPLYMDIGLTALKLGEEARVDLRRFDLESKGKEMKDLRYTWNRGQRDGLSLEFHDAGNAPMDE LRAISDAWLGGKNVREKGFSLGRFTPEYLRYFRVVVVRFQGRAVAFANLLETSGKELASIDLMRVAPDAPKLTMEFLMLGLILHYKESGHTRFSLGMVPL AGLQPRRGAPLTQRLGALVFRRGEQFYNFQGLRRFKDKFQPDWEPRYLAVPAGLDPLVALADTAALIAGGLSGLVKR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site