Pseudomonas sp. 21, UB43_RS14440
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 21 contig5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGAATCCGGTGACGCCAACCAGGACGACATCGACGCGATGATGGCCGGCGCTGCGGCTCCGGCCGCGCCCGCCGCACCGCGCGCACCGATGGAAGAGTTC GGCATGGCGCCCAAGACGCCGATGATCGCCGGGCTGGAAGGCCCCAACCTGGATGTGATCCTGGATATTCCGGTGACCATTTCCATGGAGGTCGGGCATA CCGATATCAACATCCGCAACCTGCTGCAGCTCAACCAGGGCTCGGTGATCGAACTCGATCGCCTGGCCGGCGAGCCGCTGGACGTGCTGGTCAACGGCAC CTTGATCGCCCATGGCGAAGTGGTGGTGGTGAACGAGAAGTTCGGCATCCGCCTCACCGACGTGATCAGCCCCAGCGAACGCATCAAGAAGCTGCGCTGA CATGGGCCGCCTGCTCGCGAACCTGTGCGCCCTGCCGCTGCTGGGGCTGTCCCTCTTCGCCCTGGGCGAGGAGGCCAAGGCGCCGGCATCCAACCCGGCG
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| DNA Sequence for Gene |
>UB43_RS14440
ATCGTCCACGCCAGCTCCACGCCGAGCATCATCACCGGCAGTGCCGGCGCGCAGCTGATGCAGTTGCTGCTGGGCCTGGTGCTGGTGGTCGGCCTGATCT TCCTGCTGGCCTGGCTGGTGCGTCGCGTGCAGCAGGTCGTGCCGCGCGGCAACCAGGCGATCCGCCTGATTTCCAGCCAGTCCCTCGGCCCGCGTGATCG CCTGGTGCTGGTGCAGGTGGGCGAGGAGCAGGTGCTGCTGGGCCTGACGCCCGGCCGCATCACCCCGCTGCACGTCCTGCGCCAGCCGGTGCATGCCGCC GAATCGGAGCCGGCGCAGCCGGAATTCGCCCAGCGTCTGCTGGAATTGCTGAACAAGGACAAGGGCCGCCCGCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCGTTCGCCGACTTCTTCCGTTCTGATCGCCGCATTCAAGGCCATCGCACCGTTGCTACTGGCCCTGCTGGCGCTGATGGCGCCGCAGGCCTTCGCCGC CGATCCGACGCAGCTGACGGCGATCACCGTGACCACCAACCCGCAGGGGCAGCAGGAATACTCGGTCAGCCTGCAGATCCTGCTGATCATGACCGCGCTG AGCTTCATCCCGGCGTTCGTCATGCTGATGACCAGCTTCACCCGGATCATCATCGTCTTCTCCATCCTGCGCCAGGCGCTGGGCCTGCAGAGCACGCCGT CGAACCAGGTGCTGATCGGCCTGGCGATGTTCCTCACCCTGTTCGTCATGGCGCCGGTGTTCGACAAGATCAACACGACTGCGCTGCAGCCTTACCTGAG CGAGCAGATCCCTGCGCAGGAAGCGATCACCCGCGCCGAAGTGCCGCTCAAGGCCTTCATGCTGGCGCAGACCCGGCAGTCGGACCTGGAGCTGTTCGTG
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| Amino Acid Sequence |
>flagellar assembly protein FliO
MVHASSTPSIITGSAGAQLMQLLLGLVLVVGLIFLLAWLVRRVQQVVPRGNQAIRLISSQSLGPRDRLVLVQVGEEQVLLGLTPGRITPLHVLRQPVHAA ESEPAQPEFAQRLLELLNKDKGRPQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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