Pseudomonas sp. 21, UB43_RS13130

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig5, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGGCAACCACAGCAACATCGGCGTGATGGCGCGACGGCCCGAGTACCTGCCATGGATCGCTGAGGCGCTGAGCGAAGGCGCCGTGGCCGAATGGATGCAG CACGTGCTCGACCCGCAGCTTGGCCGCGTCAGCCGCTGGCACCTGCCGGGCACACACAGTCTGAACTTCCTGCTGGAAAACGCCCTGGGCGGCGGCGGCG TGGCGAGCCTGCGCATCGACCCGCAGGGCAAGGCCTTCGCCCAGCAGTTGCTGGAATTCCCGGTGGCGGTGCCGCAAGCCATCGCCGATCGATTCCTGTA GGAGCGGGCTTGCTCGCGAACCCGGCCCCGCCGCGGCGCCTGTTCGCGAGCAAGCTCGCTCCTACGAAGAGCACGCACGACGAACGATTGAGCAGAAACG TAGGGCGCATAACGCCACCAGCGTTATCCGCCAATCGCAAACGGTGGATGAAGTGTTCCGTTTCATCCGCCCTACGGGATACCTCGGAGTCAGAACAACA
DNA Sequence for Gene
>UB43_RS13130
ATGAGCTACGACTCGATCTTCAAATCCGGCCTGTTCGACGGCCAGACCATCATCGTCACCGGCGGCGGCAGCGGCATCGGTCGTTGCACCGCCCATGAGC TGGCGGCCCTCGGCGCCCACGTGGTGCTGGTGGGGCGCAAGGCGGAGAAGTTGGAGAAGACCGCCGGCGAGATCATCGAAGACGGCGGCAGCGCCAGCTG GCACAGCTGCGACATCCGCGACGAGGAGGCGGTGAAAGCGCTGGTGGCGCAGGTCATCGCCGAGCGCGGGCCGATCCATCACCTGGTCAACAACGCCGGC GGCCAATACCCCGCGCCGCTCGCCTCGATCAACCTGAAGGGCTTCGAGGCCGTGGTGCGCACCAACCTCGTCGGCGGTTTCCTGATGGCCCGCGAAGTCT TCAACCAGAGCCTGAGCAAGACCGGCGGCAGCATCGTCAACATGCTCGCCGACATGTGGGGCGGCATGCCCGGCATGGGCCATTCCGGCGCCGCCCGCGC CGGCATGGAGAACTTCACCAAGACCGCCGCCATCGAGTGGGGCCACGCCGGCGTGCGGGTCAACGCGGTGGCACCGGGCTGGGTCGCCTCCAGCGGCATG GACACCTACGAAGGCGCGTTCAAGGCCGTGATCCCGACCCTGCGCGAGCACGTGCCGCTCAAGCGCATCGGCACCGAATCGGAAGTCGCCGCCGCCATCG TCTTCCTGCTCTCCCCCGGCGCCGCTTTCATCAGCGGCAACACCATCCGCATCGATGGCGCCGCCAGCCAGGGCAGCCGCGCCTTCCCGCTGTCCAAGGT GAAGCCGGGGCAGAGCCGTTCCTACAACGGTTTCCACCGCGCCTACCTGCCCGATGTACTGAAGGATCAGGAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGATGCCGGTCATCCAATCCGAACTCGATCCCCAGGGCGAAGACTTCGCCCGCAACCGCGAGGCCATGCTGGCTGCCGTGGCGAGCTTCCGCGAGGTCG AGCAGAAGGTGCTCGACAAGGCCGCCGAGGCCAAACCCAAGTTCGACAAGCGCGGCCAGCTGCTGCCGCGCGAACGCCTGAACCTGCTGCTGGACGCCGG TGCGCCGTTCCTCGAGATCTCCTCGCTGGCCGGCTACAAGCTGCACGACGACAAGGACGGCACCCAGGCCGGCGGCGGCATCATCTCCGGCATCGGCTAT ATCGCCGGGGTGCGCTGCCTGGTGACCGCCAGCAACAGCGCGATCAAGGGCGGCACCATCTCCCCCACCGGCCTGAAGAAGACCCTGCGCCTGCAGCAGA TCGCCTTCGAGAACAAGCTGCCGGTGGTGGCGCTGACCGAGAGCGGCGGCGCCAACCTGAACTACGCGGCGGACATCTTCGTCGAGGGCGCGCGCGGCTT
Amino Acid Sequence
>2,4-dienoyl-CoA reductase
MSYDSIFKSGLFDGQTIIVTGGGSGIGRCTAHELAALGAHVVLVGRKAEKLEKTAGEIIEDGGSASWHSCDIRDEEAVKALVAQVIAERGPIHHLVNNAG GQYPAPLASINLKGFEAVVRTNLVGGFLMAREVFNQSLSKTGGSIVNMLADMWGGMPGMGHSGAARAGMENFTKTAAIEWGHAGVRVNAVAPGWVASSGM DTYEGAFKAVIPTLREHVPLKRIGTESEVAAAIVFLLSPGAAFISGNTIRIDGAASQGSRAFPLSKVKPGQSRSYNGFHRAYLPDVLKDQE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site