Pseudomonas sp. 21, UB43_RS12510

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAGCAGCATGCGCAGCACCACCACCGAGACCCGGATCATCGGCAACCTCAGCGAACAGCAGCATTCGCGGGCCGCCGCCGAGTCGGCGCTGCGCGAAGGC GAGCGCCGGCTGGCGGCGCAGACCAGCCTGGACCAGGGCTCGGCGAACTGCACCACCAGCGTCGCGCAGCACGCCAACCTGTGCATTCTGGTCAGCGACA AATACTCCTCCAACGGCAAGGCCAGCGCCGACTGGTGGAGCAGCGACGCCACCTCCATCGCCTACCTGGGCATGGACGGCAGCTCCACCTTCGACCCGGT GCCGCGCTGGAACACCGCCTACATCGCCTTCGACCCGGCCGACTCCAACGGCAACGTGCAGATCACCGACCCCGACGAACGCTCCCAGGGGCGCGGGCCG CACTACTACCGGGTGAGCGCTGCCGCCCGCGCCGACGGGCAGCGCCTGATGAGCGTGCTGCAGACCGTCACCATCCGCCGTTACTACTGAGGAGCCTGAC
DNA Sequence for Gene
>UB43_RS12510
GTGAGCCGACGTCCCGCCCAGCCCTTCCTGCTGTTCCTGTTCGGCGGCCTGCTGCTGGCCACCGCGCTGCCCACCGATGCCGCGACGCTGACCCTGAGCC AGCAGCCGCTGTTCCTCACCGAGGGCGTGGCGCCGAACATCATGGTGACCATCGACAACTCCAACAGCATGCGCTGGAGCTTCGCCCCCGATGGCATGAA CCCCACCACCGGCAGCACCTACAACGGCTACAGCGCCGACCAGGTGCGTACCAGCCGGCGCGCCAAGTCGTCCACCTTCAACCCGCTGTACTACAACCCC AACGTCACCTACCAGGCGCCCTACAACGTCCTCTACAGCAACGCCGTCACCACCTACACGCCGCTGACCACCAGCTTCACCGCGGCCTATGTGAACGGCT TCAAGAGCGCCAAGGGCAGCCTGGACCTGAGCTCGGCGTACAAGGTTTCCTGGGAATACGACACCGCGCGGGCGACCACCGACAGCACCTACTGGACCTA CACCGGCTACAGCTCCTACAGCAGTCCCGACAAGGTCTACTACCTGGCGGCGAACCCGTCATCGGACTTCAGTTCGAGCAGTACCTCGTCCAGTACCAGC AGCTCCGCCAGTGTGAGCGGTTCCACCACGTCCACTGGCAAGTCGGCCTCGCTCACCGGCGGCGGCACCTACACCGTCACCGCCAAGAGCAACAGCTGCA CCGCGACCATCACCAACCCGAAGTCCAGCACCGGCTCGACCACCACCAACAGCGACGGCAGCACCTCCAGCACCACCACCGCCGTCAGCTACTCCACCGC CAGTTGCTCCTACACCACCAGCGGCAAGACCACCACCTACACGGTGACGTCCACCGCGACCACCACCCTGACAACGACCACCACCTACCCGGACCGCACC AAGGCCGCAGTGCCGGCGTACTACTACGTCTACAGCACCGCGCTCAGCGGCTGCACCAGCAGCGTCAACGATGACAACTGCTACAAGCTGGTGACCGTAT CCTCCACCTCCGGCACCAACGGCAGCGACGAGCGACAGAACTTCGCCAACTGGTACAGCTTCTACCGCAACCGCGAACTGGCGACACAATCAGGCGCCAA CCTCGCCTTCGTCACGCTGCCGGAGAACACCCGTCTCAGCTGGCAGGCCCTGGGCACCAGCGATACCTGCATCACCAGCAGCTCGTACCTGTCGAGCTAC AACTGCCGCGGGCTGAGCAACACCAGCACCAGCTACTACGACAACCGCCTCGGCACCTTCTCCGGCGCGCACCGGGCCAAGTTCTTCGAATGGCTGGGGG ACATCTATTTCAACCAGGGCACCCCGCTGCTGGACGCCGTCGACCGCGTCGGCTCGCTGCTCAGCGTCACCGGCAAGTACAGTCCCTACGCCTACTCCAT CGGCAGCAGCGAAACGCCGCTGTACAGCTGCCGGGCCAGCTACAGCATCACCCTCACCGACGGCATCTGGAACACCGCCGGCAGCCATGGCGACTGGGAC AGTACCAGCCGCACCCTGCCCGACGGCCAGGCCTACAGCGCACGGGCGCCCTACAAGGACAGCGCCTCCAACACCCTCGCCGACCTGGCGTTCAAGTACT GGGCCACCGACGCCCAGCCGAACATCGCCAACAACGTCAGCACCTACATCGCCGAGAGCAACAGCAACGCCACCACCCAGTACTGGAACCCGAAGAACGA CCCGGCTACCTGGCAGCACATGGTCAGCTACTTCGTCGGCCTGGGCCTGACCACCAGCCTGACCAACCCGGCCTGGGGTGGCGACACCTACTCCGGCGAC TACAGCAAGCTGGCCGCCGGCACCCTGAGCTGGCCCGCGGCTTCGTCGGGCAGCGCCAACAACGTCTACGACCTGTGGCACGCGGCAATCGACTCCCGTG GCGAATTCTTCAGCGTCGACTCGCCCGATGACCTGGTCTCCGCCCTGCAGAACGTGGTCAACCGCATCTCCCAGCGCGAGGACTCCGGCGCCGCGCCGGC ACTGGTCAGCTCGCCGCTGCTCAATGCCGACAGCAGCACTGCCGACAGCGAGCTGTACAGCTACACCCCGAAGTTCGCCAGCACCGACTGGAGCGGTGAC CTGATCAAGTACCTGCAGAACACCGCCAACGGCAGCCAGACCTCGGTGTGGAGCGCCCAGGACGTGATGGACAGCACCTACGGCAGCGGCAACAGCGCCT GGTCCACGCGCACGGTGAAGATGGCCGGCAGTACCGCCGGTACGCTGAAGGACTTCACCTGGAGCAACCTCAGCAGCGCCCAGCAGAGCACCCTCAACAA GACCCTCGCCAACGTCACCGACAGCAATGGCGAGAAGCGCGTGGCCTACCTGCGCGGCGACCGCAGCAACGAAGGCACGCTGCTGCGTACCCGCAGCACC GTGCTGGGCGACATCATCGACTCCTCGCCGGTGCTGGTCGGTCCGCCCAACCGCCTGGCCTCGCTGATGAACGCCACCGTCAGCAGCACCGACACCTCCT ACACCACCTTCAAGAGCACCTGGAGCGCGCGCCCCACGCGCCTCTACGTCGGCGCCAACGACGGCATGCTGCATGCCTTCGATGCCGACGGTAAGGAAGT CTTCGCCTACGTCCCCAGTGCCGTGATCAGCAACCTCTACAAGCTGAGCGACAGCGACTACACCAGCGCCACCCACCAGTACTACGTGGACGGCTCGCCG GTCACCGCCGACGTCTACTACGGCGGCGCCTGGCACACCGTGCTGGTCGGCACCCTGCGCGGCGGCGGCCGCGCGCTGTTCGCCCTGGACATCACCGACC CGGCCAACATCAAGCTGCTCTGGGAGAAGAGCTACAGCGACAGCGACTACAGCGAACTGGGCTTCACCTACTCGCGGCCGACCATCAGCCTGCTGCACAA CGGCACCTGGGCAGTGATCCTGGGCAATGGCTACAACGGCGCCAGCGACAAGGCCGTGCTCTACCTGATGGACGTGAAGGACGGCAGCCTGATCAAGGCC TTGACCGTCAGCGACGGCAAGACCACCGCCAATGGCCTGGCCACCCCGCGCGCCGCCGATATCAACGGCGACCTGATCACCGACTACGTCTACGCCGGCG ACCTGCACGGCAACCTCTGGCGCTTCGACCTGACCAGCTCCGGCAGCCTGACCTCCAGCACCACCGCCAGCAGCTTCCGCGTCGGCTTCGGCGGCTCGCC GCTGTACAGCGCGACCACGACGGCCGGGCAAGTGCAGCCCATCACCAGCGCGCCCTACCTGGTCAAGCACAGCTCCGGCACCGGCTACCTGGTGATCTTC GGCACCGGCAAGTACATCGAGTCCGACGATGCCGATCCGAACACCACCCAGGTGATGGGCCTCTACGGCATCTGGGACCGGCAGACCGCGGGCGAGGCCG CCAGCACCACGCCCACGCTCGGCCGCAGCAAACTGCAGCAGCAGACCATCACCCAGAGCGAGGTGACCACCTCGTTCGACAACAGCGGCACGGCGGTGAG CCAGACCATCCGCACCGTCAGCGACAACGCCGTCACCTGGTACGACAGCAGCGGCAACGTCTCGCAGTACGGCTGGTACCTGGACCTCCCCGCCACCGGC GAAATGGTGGTCAACAACCCCTACGCCACTTCCGGCGTGCTGCTCGCCAGCACCCTGACGCCCAACGAAGACCCCTGCGCCGACGGCGTCACCACCTGGC TGATGTCGCTCGACCCGTACACCGGCGGCGCCACCGACTTCGCCACCCTGGACCTGAACAACGACGGCGTGGTGGACGACAACGATCTGTACAACGGCAG CGTCGTCTCTGCCTTGCAGATGTCAGGCCTGAAGGGCGGTTTCACCGTCGGCAGCACCAGCGCCAGCAGCAGCAACGTCAACGCCTGCGGCAGCGACGGC TGCGTGAGCGTGGCAACCAGCGGCGCCAGCTCCGGACGGCAGAACTGGCTGAACATCAAGGAACAGGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACAGGCACTACCGGCAGGATGGCTTCACCCTGATGGAGCTCATGGTGGTGGTGGCGATCGTGGCGATCCTCGCCGCCGTCGTCTACCCCAGCTACCAGGA ATACGTGCTGCGCGGCAAACGCGCGGAAGGCCAGGCCCTGCTCAACCAGGCCGCGTCGCAGGAAGAGCGCTGGTATGCGCTCAACTCGGTGTCCGGCTAC GTCACCGAGCAGTCTTCGGTGGCCAACCTGAAGCTGGCCGGTACCAGTGGCAGCACCGTCACCTCCCCCACCGGCCTGTATACCCTGAAGGTAGGAGGCG GCAGCAGCGACGGCGGCTATACGCTGACGGCCAACCCGACCTTCACCGACAGCAAGTGCACGCAGCTGACCCTGACCGCCCAGGGCCAGAAGGGCAGCAA CGGGACGGGCAGCGTGAGTGATTGCTGGCGCTGAATCCCGGCCGGGCGCTCCCAGAGTTTCACTCCGCTGCCAGCCCCCCTGTAGGAGCGAGCTTGCTCG
Amino Acid Sequence
>hypothetical protein
MSRRPAQPFLLFLFGGLLLATALPTDAATLTLSQQPLFLTEGVAPNIMVTIDNSNSMRWSFAPDGMNPTTGSTYNGYSADQVRTSRRAKSSTFNPLYYNP NVTYQAPYNVLYSNAVTTYTPLTTSFTAAYVNGFKSAKGSLDLSSAYKVSWEYDTARATTDSTYWTYTGYSSYSSPDKVYYLAANPSSDFSSSSTSSSTS SSASVSGSTTSTGKSASLTGGGTYTVTAKSNSCTATITNPKSSTGSTTTNSDGSTSSTTTAVSYSTASCSYTTSGKTTTYTVTSTATTTLTTTTTYPDRT KAAVPAYYYVYSTALSGCTSSVNDDNCYKLVTVSSTSGTNGSDERQNFANWYSFYRNRELATQSGANLAFVTLPENTRLSWQALGTSDTCITSSSYLSSY NCRGLSNTSTSYYDNRLGTFSGAHRAKFFEWLGDIYFNQGTPLLDAVDRVGSLLSVTGKYSPYAYSIGSSETPLYSCRASYSITLTDGIWNTAGSHGDWD STSRTLPDGQAYSARAPYKDSASNTLADLAFKYWATDAQPNIANNVSTYIAESNSNATTQYWNPKNDPATWQHMVSYFVGLGLTTSLTNPAWGGDTYSGD YSKLAAGTLSWPAASSGSANNVYDLWHAAIDSRGEFFSVDSPDDLVSALQNVVNRISQREDSGAAPALVSSPLLNADSSTADSELYSYTPKFASTDWSGD LIKYLQNTANGSQTSVWSAQDVMDSTYGSGNSAWSTRTVKMAGSTAGTLKDFTWSNLSSAQQSTLNKTLANVTDSNGEKRVAYLRGDRSNEGTLLRTRST VLGDIIDSSPVLVGPPNRLASLMNATVSSTDTSYTTFKSTWSARPTRLYVGANDGMLHAFDADGKEVFAYVPSAVISNLYKLSDSDYTSATHQYYVDGSP VTADVYYGGAWHTVLVGTLRGGGRALFALDITDPANIKLLWEKSYSDSDYSELGFTYSRPTISLLHNGTWAVILGNGYNGASDKAVLYLMDVKDGSLIKA LTVSDGKTTANGLATPRAADINGDLITDYVYAGDLHGNLWRFDLTSSGSLTSSTTASSFRVGFGGSPLYSATTTAGQVQPITSAPYLVKHSSGTGYLVIF GTGKYIESDDADPNTTQVMGLYGIWDRQTAGEAASTTPTLGRSKLQQQTITQSEVTTSFDNSGTAVSQTIRTVSDNAVTWYDSSGNVSQYGWYLDLPATG EMVVNNPYATSGVLLASTLTPNEDPCADGVTTWLMSLDPYTGGATDFATLDLNNDGVVDDNDLYNGSVVSALQMSGLKGGFTVGSTSASSSNVNACGSDG CVSVATSGASSGRQNWLNIKEQE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site