Pseudomonas sp. 21, UB43_RS11160

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCCGTGTGCACGCCGTTGGCCGCATGGGTCGCGCCCGGCCCGCGGGTGACGAAGCAGATGCCGGGGCGGCCGGTGAGCTTGCCGTAGGCATCGGCCATG TTCGAGGCGGCGCCTTCGTGGCGGGTGACGATGGTCTGGATGCCGGCTGCATCGTGCAGGGCATCGAGCACCGGCAGGTAGCTTTCGCCGGGGATGCAGT AGACGGTATCCACCGCGTGGCGCAGCAGGGCATCGACGAGGATCTGGCCGCCGTTGCGGGCCGAAGTATCGGACATGGGCTTGGAGTTCCTGGAAGGGGC AGGGTGCGCTGATCTTCGGGCAACTGCCTCGGCGATCCAAGCGAGCATTCTTCGCAAGGTCATTCCTTCGAGGAATGCATGGGCCGTCGTAGAGCGGGCG CGACGACGAACCGCGCTGGCATTTCACCAGGTTTGACTATGGTTGATGCACGGACGCACCTGCGTCCGCAGGACGTTTTGCTGCAGAAGGAGAGCCTCCC
DNA Sequence for Gene
>UB43_RS11160
ATGTACCACCTCTCGTCCCGAGCGCTGCTCGCCGGCCTGTTCGCCACCTCCAGCCTGCCCCTGTACGCCGCCCTGCCTTCGGCGCCGGGGTATGTCGATG ACAGCGGCTACGGCGCCGCGGCCAAGACCCGCATCCTCCCGGCGATGTTCGAGCAGAAGCTCACCAGCACGAAGTACATCGCCAAGGCCGACAACCCGCT GATCACACTGGCCGAATCCACTGGCTTCAAGCAGACCTCCGATTACCACCAGACCCGCGCCTGGCTGCAGAAGCTGGCGGATGCTTCCGGCGGCGCCATC AGCCTGAGCGACCTGCCGGAGAACAGCGCCACCGGCGAGCCGATGCTGCTGGTGACCGCCAGCCGCGAGGCGGACAAGTCGGCAGCGGGGCTGAACAAGT CCGGCAGGCCGACCCTCTTCGTCGAGGCCGAAATCCACCCCGGCGAGGCCAACGGCAAGGACGCCATGTTCATGCTGCTGCGCGACATGACCACCGGCGA CAAGCCGCTGGCCGGGCTGCTGGACAAGGTCAACATCCTCTTCATCCCCACCGTGAACATCGACGGCGACCTGCGCCGCAGCCCGTACGGGCGGATCAAC CAGAACGGCCCGGAAGTCACCGGCTGGCGGGTCAACGGCCTGAACTACAACCTCAACCGCGACTTCACCAAGCTCGACAGCGCGGAAATCCGCAACGTCG CCTCGGTGTTCAACCAGTACGACCTGAGCTTCTTCGCCGATACCCATTCCACCGACGGCGCCATGTACCCCTACGACAGCTCCTATTGCCACAACGGCAA CGGCTGGTCGCCGGCCTCCAGCGAGTGGATGGACAAGGTCATGCGGCCGCCGGTGTACAAGGAGCTGGAAGGCGATGGGCATGTGGTCCACGAGTGCATC AGCTTCAACGACAACCAGGACCCGACCAAGGGCTATTACCCCTATCGCACGGACCTGGCGCGCTTCTCCAACCAGTACGGTGACATCCGCAACGTGCCCT CGATCCTCATCGAGCAGCACGCGCTGCATCCCTACGAAACCCAGGTGCTGGGCAACTACGTGATGCTCAAGGCGATGTTCCAGGTGATCGGCGACAACGC CGAGTCGCTCAAGCAGGCGATTGCCAAGGACCGCGAGCGCCTGGCCGCGCAGAAGGACGTGATCCTCACCTGGAAGCCCGGCAAGGAGCAGCAGACGCCC TTCACCGTCGGCGACTACCGCTACGAGGAGTCGCCGATCACCGGGAAGAAGACCATCGTCTGGAGCAACAAGCCCAAGCAGCTGAACGTGCCGATCAGCG ACAACTCGGTGCCGGACCTGGTGGTGAAGCGGCCGAAGCAGTTCGTGGTGCCGGTGCAGTGGAGCGAGGTGATCGCCCGGCTGAAGTCCCACGGCATCCA GATGAAGACCCTGGACAAGGCCACGCCCATCGAGGTGACCCTGCAGCGCATGGACAACATCAAGCTGGCCGGCGGCTTCGAGCCTGACCGCGCCGCCACC AACGAGATTCCCGGCTACGAGGGGCACCTGCTGGTCAGTGGCGTCGGCAAGCCGTTCCAGCGCCTGCAGACCTACCCGGCGGGCTCGGTGGTGATCGACA CCGACCAGCCGCTGGGCGTGCTGGCGATCAACCTGCTGACGGCGGAGAGCCCGGACTCGTTCTGGTCCTGGGGCTTCTTCAACTCGACCCTGGTGGTGGC CGAGGAACCCGAGGAGTACGTGATGGAGCCAATGGCGCGCAAGATGCTTGCCGAAGACCCGAAGCTCAAGGCCGAGTTCGAGAAGAAGCTCAAGGACGAC AAGGCCTTCGCCAAGGACGCCCAGGCGCGCCTGCAGTGGTTCTTCCAGCGCACGCCGTTCCATGACGCGAATGCCTACGTGTATCCAGTGGGGGCGGTGT ACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGAAATCTGTAGGAGCGAGCTTGCTCGCGAACGCTCTGGCTTGGGAGTTGGGGCGGTTCGCGAGCAAGCTCGCTCCTGCATGAGGCGGTTCAGGGATGTT GCTGGCGTAGCGCTCGTAGTTGCACGGGCAGCTTCGGAACTTCATCGCGGACAATGCTCCACAGGGTATCGTTGTCGATGCCCAGGTAGCCATGGATCAG GCGATTGCGAGTGGCGACAAGCATGCGCCATGGAACTTGCGGATGCGTTTGGCGCGTTTCTTCGGGGATGCGCGTTGCCGCTTCGCCAATGATTTCCAGA TTGCGTACTGTTGCGTCGTAGACCAGCGGGGTGTCGATGAACGCCTGTTGGTCCAGCCCTGCGCAGTACGTGAGCACTTTTTCTGCGCAGCTGATCATGT CGTCGATGTAGAAATGCCAGACCCGCTCCGGTCGTTCAGACATTCACCGCCTCCGCTTCGATGAACGGGCGCAACTCGGGCCGCAGAGCCTTCTCGGTGA
Amino Acid Sequence
>peptidase
MYHLSSRALLAGLFATSSLPLYAALPSAPGYVDDSGYGAAAKTRILPAMFEQKLTSTKYIAKADNPLITLAESTGFKQTSDYHQTRAWLQKLADASGGAI SLSDLPENSATGEPMLLVTASREADKSAAGLNKSGRPTLFVEAEIHPGEANGKDAMFMLLRDMTTGDKPLAGLLDKVNILFIPTVNIDGDLRRSPYGRIN QNGPEVTGWRVNGLNYNLNRDFTKLDSAEIRNVASVFNQYDLSFFADTHSTDGAMYPYDSSYCHNGNGWSPASSEWMDKVMRPPVYKELEGDGHVVHECI SFNDNQDPTKGYYPYRTDLARFSNQYGDIRNVPSILIEQHALHPYETQVLGNYVMLKAMFQVIGDNAESLKQAIAKDRERLAAQKDVILTWKPGKEQQTP FTVGDYRYEESPITGKKTIVWSNKPKQLNVPISDNSVPDLVVKRPKQFVVPVQWSEVIARLKSHGIQMKTLDKATPIEVTLQRMDNIKLAGGFEPDRAAT NEIPGYEGHLLVSGVGKPFQRLQTYPAGSVVIDTDQPLGVLAINLLTAESPDSFWSWGFFNSTLVVAEEPEEYVMEPMARKMLAEDPKLKAEFEKKLKDD KAFAKDAQARLQWFFQRTPFHDANAYVYPVGAVY
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site