Pseudomonas sp. 21, UB43_RS08930

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGTTCGGTGCCGTCGCGGACGAAGTCCTCGCTGACCCACTTGGCTTCCGCCGGCCAGATGTGTTCCTGCAGCCAGGTCATCAGCGCCAGGTCGTCTGCC AGGCCGCGGAACAGGCTCATCGCTGCGTGGCCGTGGGCGTTGATCAGTCCGGGGGAGAGCAGCATGCCCGGAAGCTCGCGGGTTTCCGTGGCCGGGTGGC GCAGCGCTTCGGTGCGCGGGGCGAGCAGGGCGATGCGACCGTCGCGGATGCCAAGGCCGTGATCACGCAGGACGACGCCGGCGGGCTCGACAGGGACGAT CCAGGTGGGGAAGAGCAGCAGGTCGAGCGGGGCTTTTTCGGTCGGCATGAAGCGCATCCTGGGCGCGTGGATAAAGGCGCGGAGTATAGCCGAGCACCGG GGCTTCAGGCTCGGTATACTCGGTCGTTTCCCGGTGTTCCCGGGGCGATTTCCGTGGCGCCGGAGCGGCCCGCGATTCCATTGAAATGAAGAGGTGTTCC
DNA Sequence for Gene
>UB43_RS08930
ATGCGTGAGCGACTGTTGGCGGCCGAACGGGTCACGGCCATTGATTGGCGCAAGGGCACACTCCGTCTGCTGGACCAGCGCCTGTTGCCGCTGGAGGAAA CCTGGCTGTCCTACGAGACCGCCGAAGGCGTAGCCGACGCCATTCGCCAGATGGTCGTGCGCGGCGCGCCGGCCATTGGCATCGCTGCCGCCTATGGCCT AGTGCTGGGCCTGCGTGCCCGTGTGGCCGCTGGTGGTGACTGGCGCGCGGCGCTGGAAGACGATTTCACCGTGCTGGCCGAGTCGCGTCCCACCGCGGTC AACCTGTTCTGGGCGCTGAACCGCATGCGCGACCGCCTGGAACGCCTGAAGCCGGGCGAAGACCCGCTGCCGCTACTGGAAGCCGAGGCCGTGGCGATCC ACGAAAGTGACCGCGAAGCGAACCTGACCATGGCCCAGTTGGGCGTGGACCTGATCCGCAAGCACCACGGCGGCCCGCAGAAGATTCTCACCCACTGCAA CACCGGCGCCCTGGCTACCGGCGGCTTCGGCACCGCGCTGGGCGTGCTGCGCGCGGCGCACCTGGAAGGGCTGATCGAGCGTGTCTACGCCGACGAGACC CGCCCCTGGCTTCAGGGCGCTCGCCTGACTGCCTGGGAGCTGGCCAACGAAGGCGTGCCAGTCACCCTGAACGTGGATGCCGCCGCCGCGCACCTGATGA AGACCGAAAGCATCACCTGGGTCATCGTCGGCGCCGACCGCATCACCGCCAACGGCGACGTCGCCAACAAGATCGGCACCTACCAGCTGGCGGTTACCGC CATGCACCACGGCGTGCGTTTCATGGTGGTGGCGCCCAGTTCGACCATCGACATGGGGCTGGAAAGCGGCGAGGACATCCCGATCGAGGAGCGCGACGGT CGCGAACTCCTGGAAATCGGCGGCAAACGTGTCGCTGCTGACGTCGAAGCCTTCAATCCGGTGTTCGATGTGACTCCGGCCGACCTGATTGACGCCATCG TGACCGAGCGCGGCGTCGTCGAGCGTCCGGACGCTGAACGGATGGCCCAGCTGATGAGCCGCAAGCGCCTGCACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGGGGGCTGCGGCAATTCATCGAGGGGCTTGGCCGAGGGTAGGGTTTGACCCTGGCTTGTGGTAAGCTCCGACGGTTCTTGATGGGGCATTTTTTCGGCC CCCACAGCATCGCGGATCAACGGCCAAGTCGTTGATTTGTAGAGAGTCGGTGGCGCTTTGATGGCGCACCGCGCTCCGCCACGCCCAGGACGGGCATGAC GGAGACCCATTTGAAAAAGGAACCAGGCTTCTCATGGGCGAACTGGCCAAAGAAATCCTCCCGGTCAACATCGAAGACGAACTCCGACAGTCCTACCTCG ATTACGCCATGAGCGTGATCGTCGGTCGTGCCCTGCCCGATGCACGCGATGGCTTGAAGCCCGTGCACCGCCGCGTCCTGTACGCCATGAGCGAACTGGG CAACGACTGGAACAAGCCCTACAAGAAATCCGCCCGTGTGGTCGGCGACGTGATCGGTAAGTACCACCCGCACGGCGACACCGCGGTGTACGACACCATC
Amino Acid Sequence
>methylthioribose-1-phosphate isomerase
MRERLLAAERVTAIDWRKGTLRLLDQRLLPLEETWLSYETAEGVADAIRQMVVRGAPAIGIAAAYGLVLGLRARVAAGGDWRAALEDDFTVLAESRPTAV NLFWALNRMRDRLERLKPGEDPLPLLEAEAVAIHESDREANLTMAQLGVDLIRKHHGGPQKILTHCNTGALATGGFGTALGVLRAAHLEGLIERVYADET RPWLQGARLTAWELANEGVPVTLNVDAAAAHLMKTESITWVIVGADRITANGDVANKIGTYQLAVTAMHHGVRFMVVAPSSTIDMGLESGEDIPIEERDG RELLEIGGKRVAADVEAFNPVFDVTPADLIDAIVTERGVVERPDAERMAQLMSRKRLH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site