Pseudomonas sp. 21, UB43_RS07985

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTCGTTGGAGAGATCCAGTTCCAGGCGAATGTCCGGGTACTGGCGGGAAAACTCCATCAGCCAGGCATCGAAGAAGGTCTCGCCCAGCGACACCGGCACG CTCAACCGCACCTTGCCCTGCGCTTCCTCCTGCAACGCCAGCACCGCCTGCCGCGCCCGCGCCGCCTGGGCGTTGAGCGCCTGGGCCTCGGGCAGCAATG CGGCACCGGCGGCGGTCAGCGACAGGCGCCGGGTCGTGCGGTGCACCAGGGTCGCCCCCAGCGCCTGCTCCAGCGCGGAAATGCGCTTGGACAGCTGGCC TTTGCTGCAGCCGAGCCTCTCCGCGGCACGGGTGAAGCTGCCGCATTCCAGCAGCACGGCGAAGGCGGAAAGGTCTTCCAGGTCGCTGGCGATTGTTTCC ATATGAAAACCAAAGGTTGTCGATTGACTGGATTATCAAAACAGAAGGTCACTCTAGACTGAATTCACTTTCAGCCAAACCACCTCAGTGGAGAGCCTTC
DNA Sequence for Gene
>UB43_RS07985
ATGAAAATCATCCTGATCGGCGCCAGCGGCACCCTCGGCCAAGCCGTCGCCAACGAACTGGGCCAGCGCCACGAGATCGTCCGCGTCGGTCGCAACAGCG GCGACTATCGCGTGGATATCACCGACAGCGCCTCGATCCGCGCGCTGTTCGAGCAGGTCGGCGGATTCGACGCCCTGATCAGCGCCGCCGGCAAGGTGCA CTTCGGCGCGCTGGCGGAAATGGGCGAGGCGGAAATGGCGGTCGGCCTGAAGGACAAGCTGATGGGCCAGGTGAACCTGGTGCTGATCGGCAGCCAGTAC GCCAACGACGGCGCCTCCTTCACCCTCACCACTGGCATCCTCAGCGAACAGCCCATCGTGCTGGGCAGCTCGGCCAGCCTGGTCAACGGCGCGGTGGAAG GCTTCGTGCGCAGTGCCGCCCTGGAACTGCCGCGCGGCCAGCGGATCAACGCGGTGAGCCCGAACGTGCTGGTGGAGTCGATGGAGGGCTACGCGCCTTT CTTCCGCGGCTTCAAGCCGGTGCCGGCCGCCGATGCCGCCCTGGGCTTCGCCCGCAGCGTGGAAGGCAAGCAGAGCGGGCAGGTTTACAAGATCTGGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGGCGAACTCTGTCGCCCTCTGTAGGAGCGGGCCGTGCCCGCGATCGCGCGCATGGCGCGCTCCTACACGGTCATTCCGACTTGCCCGCGTAGCAAACA GGCGAGCTGCCCTCACCCTGTTTCTCCAGCTCGTCCTCGAGGAACTCCGCCAACACCTGCGCGTTGTTGTGCTCCTCGTCCTTGGCCGCATAGAGCAGCG TCAGCGTGCCCTTGCGCGCAAGGGCCAGCAGGCCCATCCAGTGCTCCGGGTGGGCATTCAGCTCGCCGTGGTAGGCCTTGCGGAAGTCCTCGAACAGATT CGGGTCGTGGTGGAAGCGCTGGCGCAGCTCGTTGGACGGCGACACCTCCTTGGCCCACAGCGCCATGTGCAGGTCTTCCTTGCGAATCCCCCGTGGCCAC AGACGGTCCACCAGCACCCGCTGGCCGTCTTCCTGCGCCGCCGGTTCGTAGGCGCGCTTGCAACGAATCATCCGAAATCCTCCTCGTCAGCTTGAGGTGG
Amino Acid Sequence
>short-chain dehydrogenase
MKIILIGASGTLGQAVANELGQRHEIVRVGRNSGDYRVDITDSASIRALFEQVGGFDALISAAGKVHFGALAEMGEAEMAVGLKDKLMGQVNLVLIGSQY ANDGASFTLTTGILSEQPIVLGSSASLVNGAVEGFVRSAALELPRGQRINAVSPNVLVESMEGYAPFFRGFKPVPAADAALGFARSVEGKQSGQVYKIW
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site